Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05277 ATGGCAGCTAATCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTGTTTGGAGGAAGGTTGATATTTGGGCCTGACGCAAAGTCATTGCTTATCAGTTTGGTGCTGGTCATAGTTCCAGTTATCATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTCAATATTTATGTGTTGATACTTCTCTTTTTTACTTCTGCACGCGATCCGGGCATTATTCCAAGGAATTTACATCCGCCCGAGGAAGATTTCCGTTATGATTCGTCTGTTTCTATTGACATTGGGGGACGGCAGACACCAAGCCTTCAGTTCCCTCGAACAAAGGAGGTAATGGTCAATGGCCTTCCTGTAAGAGTGAAGTATTGCGAGACCTGTATGCTGTATCGTCCTCCTCGTTGCTCACATTGTTCCATCTGCAACAATTGTGTTCAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGCATTGGACTGAGGAACTACCGTTACTTCTTTATGTTTGTTTCTTCGGCAACTCTTCTATGCATCTATGTGTTTTCGATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTGTACTAATGGCATATTGTTTCATTGCTCTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGTACAAACCAGACCACCTATGAAAACTTTCGATACAGAGCAGATAGCAGGGTCAATGTTTACAATCGGGGTTGTATAAATAATTTTCTCGAAGTATTTTGTACAAAAGTGCAGCCTTCAAAAAACAATTTTCGAGCTTTTATTCAAGAAGAGGTACAGAGGCCACCTCCTCAAGTTGTTTCCCCGGAACTGGAACCAGATTCAGGAGGAGATCATCGTTCTAAGGTTGAAGATGATCTAGACATCGGTGAAGACCTATTGAAGATATCACAGCGCCGGAATATTGAAGGATTTGATGAAGAAATTCGGAGTAGAGGGAGCAATGGACCTTACCATAATACTTCCGAAGGTGATTCAGTTTTGGGCTCAGATCGTCGAGCTCCAACAGTTCGATCTGACGAAAGGCACTCAAGTAGGAGAATAAGTGAAAGCTGGGAAATTGCACCAGATGCACTTGCCAATTCAAATGTAACTGAAACTAGAAGCTATGTTTCTTCGCGTCATTGA 1263 0.4196 MAANRVYEAWKGSNKFLFGGRLIFGPDAKSLLISLVLVIVPVIIFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFFTSARDPGIIPRNLHPPEEDFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGLPVRVKYCETCMLYRPPRCSHCSICNNCVQRFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSISAFYIKVLMDHNHGTVWKAMKESPASVVLMAYCFIALWFVGGLTGFHLYLIGTNQTTYENFRYRADSRVNVYNRGCINNFLEVFCTKVQPSKNNFRAFIQEEVQRPPPQVVSPELEPDSGGDHRSKVEDDLDIGEDLLKISQRRNIEGFDEEIRSRGSNGPYHNTSEGDSVLGSDRRAPTVRSDERHSSRRISESWEIAPDALANSNVTETRSYVSSRH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05277 420 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 38 305 - -
Vivi2g05277 420 MobiDBLite consensus disorder prediction 350 394 - -
Vivi2g05277 420 MobiDBLite consensus disorder prediction 307 329 - -
Vivi2g05277 420 ProSiteProfiles DHHC domain profile. 139 189 - -
Vivi2g05277 420 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
Vivi2g05277 420 MobiDBLite consensus disorder prediction 379 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05277 Vivi-Chr2 176783787 176791816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05277 65 285 Lipid Metabolism Gene Families AT4G22750 26.872 7.29e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05277 K16675 - gmx:100795934 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05277 2 176783787 176791816 Vivi2g05277 2 176783787 176791816 ECH
Vivi2g05277 2 176783787 176791816 Vivi1g04549 1 97317043 97319603 PCT