Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05174 ATGTCTCAAGTTGTCGCCACGCGATCCATCCAAACCACCCTCCCCAGTTCTGGATCTACACATGACAGAGCTCAGAAGCTCTTAAAGCCTCCATCTTTTGCTTCCAAAGTGTTCCAACCAAAAGGGAACAAGTGTTCTAAATTGGTCTTCAGAAGCTCTCATATCAGTGCAAGGAAATCAGCTTCTGTTGAAGTTGTACCTGTGTCACCTGAAGATGATCCAAAGATTGAGGAGCATTTGCAGCGTTTGCGTGGGGTACAGCCATTTGGCGATACTTCTAATGGAATATGGTCTAAACCGACAGTTAAGCGTAAGACAAAAATAGTATGTACCATTGGACCTTCTACCGATACTAAGGAAATGATTTGGAAGTTGGCTGAGGCTGGTATGAATGTTGCTCGTCTAAATATGTCTCACGGTGATCATGCTTCTCATCAAAAAGTTATTGACTTGGTTAAAGAATATAATGCACAATCCAAGGACAATGTTATTGCAATTATGCTTGACACCAAGGGTCCAGAGGTTAGGAGTGGGGATTTGCCACAACCAATCAATTTGACAACCGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCCGATTGTGTCAGTGTGAACTACGATGATTTCGTCAATGATGTAGCAGAGGGGGACATGATTCTTGTTGATGGTGGTATGATGTCGTTGATGGTTAAGTCGAAGACAGAGACTTTAGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTTAAGTCAAGGAGACATTTGAATGTTCGAGGGAAAAGTGCAACATTGCCTTCAATAACAGAGAAGGATTGGGATGATATCAAATTCGGAGTGGATAACAAAGTTGATTTTTATGCTGTTTCCTTTGTTAAGGATGCCGAAGTTGTTCATGAATTGAAGAATTATTTGAAGAGTTGTGATGCTGATATACATGTCATTGTAAAAATTGAAAGTGCGGATTCTATACCGAATTTGCATTCAATTATCACTGCATCCGATGGGGCTATGGTTGCCAGAGGAGATCTTGGCGCCGAGCTCCCTATTGAAGAGGTTCCGCTTTTACAGGAAGAGATAATCAACTTGTGTCGTAGCATGGGAAAGGCTGTGATTGTTGCAACGAATATGCTTGAAAGTATGATTGTTCATCCAACTCCAACTAGAGCTGAGGTATCAGATATAGCTATCGCTGTTCGAGAAGGCTCTGATGGAATAATGCTGTCCGGAGAAACCGCTCATGGAAAGTTCCCGCTAAAAGCTGTGAAAGTGATGCACACTGTAGCGTTACGGACAGAAGCCACAATACAAGGCGGTCAAATGCCACCTAACATTGGTCAAGTGTTCAAGAATCACATGAGTGAGATGTTTGCATACCATGCAACCATTATGTCTAACACACTAGGAACCTCTACCGTCGTCTTCACTCGAACAGGTTTCATGGCTATCCTACTCAGTCACTATCGTCCTTCTGGCACGATATTTGCTTTCACAGACGAGAAGAGGGTACAACAAAGACTGGCTTTGTATCAAGGAGTTTGCCCTGTATACATGGAGTTCAGTGACGATTCCGAAGAAACTTTCACAAGAGCCTTGGATTTTCTACAGAAGCAAGGAATGGTTAAGTTAGGAGAAGAAGTTGCACTTGTACAAAGTGGTAGACAACCCATATGGAGATTCCAATCCACTCACAACATTCAAGTCAGGAAAGTTGAATAA 1725 0.4243 MSQVVATRSIQTTLPSSGSTHDRAQKLLKPPSFASKVFQPKGNKCSKLVFRSSHISARKSASVEVVPVSPEDDPKIEEHLQRLRGVQPFGDTSNGIWSKPTVKRKTKIVCTIGPSTDTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPINLTTGQEFTFTIQRGVGTADCVSVNYDDFVNDVAEGDMILVDGGMMSLMVKSKTETLVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIQGGQMPPNIGQVFKNHMSEMFAYHATIMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPVYMEFSDDSEETFTRALDFLQKQGMVKLGEEVALVQSGRQPIWRFQSTHNIQVRKVE 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05174 574 FunFam Pyruvate kinase 435 554 - -
Vivi2g05174 574 FunFam Pyruvate kinase 269 434 - -
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 162 178 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 412 428 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 368 392 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 316 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 343 367 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 PRINTS Pyruvate kinase family signature 393 411 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 SUPERFAMILY PK beta-barrel domain-like 173 264 IPR011037 -
Vivi2g05174 574 NCBIfam pyruvate kinase 104 572 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 SUPERFAMILY PK C-terminal domain-like 422 573 IPR036918 -
Vivi2g05174 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 438 IPR015813 GO:0003824
Vivi2g05174 574 Pfam Pyruvate kinase, barrel domain 104 439 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 MobiDBLite consensus disorder prediction 1 24 - -
Vivi2g05174 574 FunFam Pyruvate kinase 174 267 - -
Vivi2g05174 574 Gene3D - 106 431 IPR040442 -
Vivi2g05174 574 PANTHER PYRUVATE KINASE 97 551 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vivi2g05174 574 ProSitePatterns Pyruvate kinase active site signature. 314 326 IPR018209 GO:0004743|GO:0006096
Vivi2g05174 574 MobiDBLite consensus disorder prediction 1 23 - -
Vivi2g05174 574 Pfam Pyruvate kinase, alpha/beta domain 466 553 IPR015795 -
Vivi2g05174 574 Gene3D - 174 267 IPR015806 GO:0004743|GO:0006096
Vivi2g05174 574 Gene3D - 446 574 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05174 Vivi-Chr2 174338448 174343207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05174 K00873 - gmx:100809327 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05174 2 174338448 174343207 Vivi2g05174 2 174338448 174343207 ECH
Vivi2g05174 2 174338448 174343207 Vivi1g04479 1 95364575 95368590 PCT