Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03830 ATGGCGTTACAAGGAAAGCTAGATAGATTCAAAAAGCAGCAGGAGAAATGTCAAACAACGCTTTCGAGCATAGCCGCTACCAAGACTGCATCTGCGTCGATGCCGAGTGCTCTTGTTCCTGTCAAATTCTCAACTGATACCGAGAGGCTTCAGCATATTAACAGTATACGTAAAGCTCCTGTTGGAGCCCAGATGAAGCGTGTGATTGATCTCCTTTATGAGACTCGGCAGGCTTTAACGTTGGAGCAAATAAACGAAACATGCCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATATGATGGAGAAAGATTCTCTTACAAGTCGAAACACGCCCTCCGGGACAAAAAGGAGCTGCTTTTCCTGATACGCAAATTTCCGGAGGGCATTGCTGTTATTGACTTGAAGGATTCGTACCCTACTGTAATGGAGGACTTGCAGGGTTTGAAAGCTGGCAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGGTTTTTCGTGGGATTGAGTTGCCCCGTGATATGATCGATATAGAGAGGGATCTCCAAAAAAATGGAATGAAACCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAACCTAAGAAGAAGAAGAACGAAATCACCAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAAGAACTGA 810 0.437 MALQGKLDRFKKQQEKCQTTLSSIAATKTASASMPSALVPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQGLKAGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQVFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03830 269 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 49 124 IPR003166 GO:0006367
Vivi2g03830 269 MobiDBLite consensus disorder prediction 219 269 - -
Vivi2g03830 269 Pfam TFA2 Winged helix domain 2 124 181 IPR040501 -
Vivi2g03830 269 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 268 IPR016656 GO:0005673|GO:0006367
Vivi2g03830 269 Pfam TFIIE beta subunit core domain 63 122 IPR003166 GO:0006367
Vivi2g03830 269 PIRSF TFIIE-beta 5 268 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03830 Vivi-Chr2 149961624 149965169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03830 K03137 - gmx:100788089 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03830 2 149961624 149965169 Vivi5g05822 5 162185685 162189109 PCT