Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03657 ATGATGCAATTCACCTCCAACGTACCCGCTCATAACCTTACTAAATTTCAAGCATTAAGATGCCCCAGTTTCAGATGCCACTCTTCTTCCGTCAAACAACAATCTTCCTCTTTTTCTTCTCATCAAACTAATAACAACAGCAACCCATCTAGGTTACATCTCTCCAATCTTGATAACTTTCTCCAAACCCAAAACCCATTACAATCAACCACCCAACAACAACAACAGATTCAAATACAACCCATTCAGAAAACCGACTCAAACAACAAAAAAGGAAAAAACTTCCTCCAAGGTCTCAACCTAGCAAAACTATGGCCAGAAATCAAAGCAGCTGAAGAAATCTCTCCACGCCACCTAAAACGTCTCCAGCGCCTCCTCTCCAAAACCGCCGAATATTCCCCCAGAAACATCATCGCCGCCAACTGGAAACAATACCACGGCAGCAACGACTGGAAAGGTATGCTAGATCCCCTCGACGACAATCTCCGCCGAGAAGTCGTTCGATACGGGGATCTAGTCCAAGCCGCCTATCAAGCTTTTCACTCCGATCCCGCCATGTCATCCACCGAACCACCTCAGCCTCGCCACGTCACCTTACCGGAAAGATCCTACAAAGTTACCAAAAGTCTCTACGCCACGTCATCCATCGGGTTACCTAAATGGCTGGACGAAGTCGCTCCAGATCTCGGATGGATGACCCAGCGATCAAGCTGGGTCGGATTCGTCGCAGTCTGCGACGATAGGAGAGAGATCGCGAGAATGGGAAGACGAGACATCGTGATCTCTCTCCGCGGTACTTCCACTTGTCTCGAATGGGCCGAAAACATGAGAGCCCAATTAGTTAACTTAACAAATGATAACAAAATCCAAACCCAAGCCCAGACAAAGCCGAAAGTCGAATGCGGGTTTATGAGCTTATACAAAACAAAAGGAGCCCATGTTGAAAGCCTATCAGAATCAGTAGTTGAAGAAATAAAACGTCTTATCGAACTCTACAAAGGTGAAGAATTAAGCATTACAGTAACCGGACACAGCCTTGGCGCGACACTGGCATTATTAGTAGCCGATGAGATCAGCACGTGCGGGCCTGAAGTCCCGCCCGTGGCAGTTTTCTCATTCGGCGGGCCTCGTGTGGGCAACAAGGCCTTCGGAGAACACCTCAAAAGCAAAAACGTGAAAGTTCTCAGAATAGTAAACACACAAGACGTGATCACAAGGGTGCCAGGAATATTCTTAAGCGACGAGCTGGAAGAGAAAATCAAGAACTCAAAGGTTGTTAGTGGAATGGTTGATATGTTGGAAGAGAACACTCCTTTAGGATATTCGCACGTTGGAACGGAATTACGTGTTAATACAAGGATGTCGCCGTATTTGAAGCCTGATGCTGATATAGCTTGTTGTCATGATTTGGAAGCTTATTTGCATTTGGTGGATGGGTATATGGCATCTAATTGTCCGTTTAGAGCTAATGCTAAGAGGAGTTTAGCTAGATTAATGCAAGATCAAAGTGCTAATGTTAAGAAATTGTATACTAGTAAGGCAAAAGGGTTGTCTGTTAATCTTAGTAGACAGGTATCCATAGAAAGATTGTCTGTTAATCTTAGTAGACAGGGATCTATGTCTATGTCTACTTGTTGTCCTAGTCCTTCATCTTCATGA 1659 0.4491 MMQFTSNVPAHNLTKFQALRCPSFRCHSSSVKQQSSSFSSHQTNNNSNPSRLHLSNLDNFLQTQNPLQSTTQQQQQIQIQPIQKTDSNNKKGKNFLQGLNLAKLWPEIKAAEEISPRHLKRLQRLLSKTAEYSPRNIIAANWKQYHGSNDWKGMLDPLDDNLRREVVRYGDLVQAAYQAFHSDPAMSSTEPPQPRHVTLPERSYKVTKSLYATSSIGLPKWLDEVAPDLGWMTQRSSWVGFVAVCDDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLVNLTNDNKIQTQAQTKPKVECGFMSLYKTKGAHVESLSESVVEEIKRLIELYKGEELSITVTGHSLGATLALLVADEISTCGPEVPPVAVFSFGGPRVGNKAFGEHLKSKNVKVLRIVNTQDVITRVPGIFLSDELEEKIKNSKVVSGMVDMLEENTPLGYSHVGTELRVNTRMSPYLKPDADIACCHDLEAYLHLVDGYMASNCPFRANAKRSLARLMQDQSANVKKLYTSKAKGLSVNLSRQVSIERLSVNLSRQGSMSMSTCCPSPSSS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03657 552 CDD Lipase_3 195 478 - -
Vivi2g03657 552 Gene3D alpha/beta hydrolase 141 528 IPR029058 -
Vivi2g03657 552 Pfam Lipase (class 3) 260 410 IPR002921 GO:0006629
Vivi2g03657 552 MobiDBLite consensus disorder prediction 33 53 - -
Vivi2g03657 552 Coils Coil 273 293 - -
Vivi2g03657 552 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 51 514 - -
Vivi2g03657 552 SUPERFAMILY alpha/beta-Hydrolases 165 481 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03657 Vivi-Chr2 146132762 146134631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03657 53 514 Acyl Lipid Metabolism Gene Families AT4G16820 59.785 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03657 - - tpra:123911420 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03657 2 146132762 146134631 Vivi1g04017 1 84821753 84825744 PCT