Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04017 ATGAGACTAAACGGAGAGTTTTCGAGCGGCGAAGAAGAAGAAGTAATGGAGAAATCTGAGGTCGGTACGACGCCGTTTTTGGGACAGAAGATTGTTGTTGGCTATGCTTTAACGGCTAAGAAGAAGAAAAGCTTTCTTCAGCCCAATTTCATTTCTCTTGCAAGGAGCAAGGGCATATACTTTGTTTCCATTGATGTGAACAAGCCACTGCCAGAACAAGGTCCATTTGATATTGTCTTGCATAAGTTGTCGGGAGAGGAATGGCGTGATATGATCGAGGATTTCAGGCAAAAACATCCCGATGTAATTGTTCTTGATCCCCCTGATGCAATTCAACATTTACACAATCGCCAATCCATGCTTCAAGATGTGGTGGATCTAAACTTATCTGAGACCTACGGCAAGGTTGGCATCCCAAGTCAGCTAGTCATCACAAAAGACAAAGACTCGTCTACTATCCCTTATGAAGTCACCAAAGCTGGGTTGAAGTTGCCATTAGTTGCGAAACCTTTAGTTGTGGATGGCACTGCAAAGTCACATGAACTATATCTTGCTTATGACGAGTTCTCTCTTTCAGAGCTTGAACCTCCTCTGGTTCTACAAGAGTTTGTGAATCATGGCGGTCTTCTCTTTAAAATCTATATTGTTGGGGAAAGCATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATCAGTAAACGCGAGCTATCAAAAGTCGCAGGTGTATACCGATTTCCCAGAGTTTCATGTGCAGCAGCTTCTGCAGATGATGCTGATCTAGATCCTAGTATTGCCGAACACCCACCAAGATCTTTGTTGGAAAAGCTTGCAAAGGAGCTTCGACATAGATTGGGACTTCGTATGTTCAACGTAGATATGATTCGGGAATACGGGACCAAGGATGTTTTTTATGTCATTGACATCAACTACTTTCCAGGGTTCGGAAAAATGCCAAACTACGAGCCTGTATTTACGGATTTTCTACTAAACCTAGTGCAGAACAAGTGTAAGAAGAAACTTACTGCCTAA 1029 0.4257 MRLNGEFSSGEEEEVMEKSEVGTTPFLGQKIVVGYALTAKKKKSFLQPNFISLARSKGIYFVSIDVNKPLPEQGPFDIVLHKLSGEEWRDMIEDFRQKHPDVIVLDPPDAIQHLHNRQSMLQDVVDLNLSETYGKVGIPSQLVITKDKDSSTIPYEVTKAGLKLPLVAKPLVVDGTAKSHELYLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYIVGESIKVVRRFSLPNISKRELSKVAGVYRFPRVSCAAASADDADLDPSIAEHPPRSLLEKLAKELRHRLGLRMFNVDMIREYGTKDVFYVIDINYFPGFGKMPNYEPVFTDFLLNLVQNKCKKKLTA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04017 342 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 107 318 - -
Vivi1g04017 342 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 29 336 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vivi1g04017 342 FunFam Inositol-tetrakisphosphate 1-kinase 143 243 - -
Vivi1g04017 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 32 111 IPR041429 -
Vivi1g04017 342 FunFam Inositol-tetrakisphosphate 1-kinase 22 132 - -
Vivi1g04017 342 ProSiteProfiles ATP-grasp fold profile. 130 337 IPR011761 GO:0005524|GO:0046872
Vivi1g04017 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 132 329 IPR040464 -
Vivi1g04017 342 PIRSF ITPK 8 342 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vivi1g04017 342 Gene3D - 16 133 - -
Vivi1g04017 342 Gene3D - 144 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04017 Vivi-Chr1 84821753 84825744 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04017 K00913 - gmx:100127410 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03657 2 146132762 146134631 Vivi1g04017 1 84821753 84825744 PCT