Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03438 ATGAAATTGAAAGCGGTTAAAGAAAATTGGAGATGGAAAACGAACAAGTTCGGGTTACGTTCTGTTTTCCTCTTATGCGTCTTCTTCTTCCTCGCTGGATTTTCTGGTTCTAGATTCTTCCATCACTCTCAGGAAGATGAATATGATGTGAGAGCAAGATTGCTGGAAAAGTCGACGAAGGAGGAAGTGGAGTACCGTTTGTTGCATGGTGGATACTCCGGTGATGATTTCATTACTTCAATTCCTTTTCAGATTTTGAGTTGGAACCCTCGCATTCTCTATTTTCCTAATTTTGCAAATGCGAAACAATGTGAAAACATAGTTGAGATGGCAAAGGAAGGGCTTACACCATCAGAAGTGTTGTTACGCAAGGGAGAGACGGAGGAGAATACGCAGGGAGTCAGAACAAGCTCTGGTGTATTTATCAACACTACTGAGGACAAAACGGGTGTTTTAGAAGTCATTGAGGAGAAAATAGCCCGAGCAACAAAACTTCCCAGGACTCATGGAGAGGAATTTAATATCCTCCGCTATAAGATCGGACAAAAGTATGATTCTCACTATGATGCATTCAATCCCTCCGAATTTGGCCCACTAGATAGCCAAAGGGTAGCTTCATTTTTATTGTATTTAACAGATGTCGAAGAAGGTGGGGAGACCATGTTTCCATTTGAGAATGGGTTGAACATGGACGGTAGCTATCGTTATAAGGATTGTATTGGTTTGAAAATAAAACCACGAAAAGGAGATGGGATACTTTTTTATTCCTTGTTCCCTAATGGTACACTTGATCCGACCTCACTCCATGGGAGCTGCCCCGTGATTAAAGGAGAGAAGTGGGTAGCTACAAAATGGATACGGAATCAAATAGTAGAATACGATGATTAA 888 0.4122 MKLKAVKENWRWKTNKFGLRSVFLLCVFFFLAGFSGSRFFHHSQEDEYDVRARLLEKSTKEEVEYRLLHGGYSGDDFITSIPFQILSWNPRILYFPNFANAKQCENIVEMAKEGLTPSEVLLRKGETEENTQGVRTSSGVFINTTEDKTGVLEVIEEKIARATKLPRTHGEEFNILRYKIGQKYDSHYDAFNPSEFGPLDSQRVASFLLYLTDVEEGGETMFPFENGLNMDGSYRYKDCIGLKIKPRKGDGILFYSLFPNGTLDPTSLHGSCPVIKGEKWVATKWIRNQIVEYDD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03438 295 Gene3D q2cbj1_9rhob like domain 83 287 - -
Vivi2g03438 295 FunFam Prolyl 4-hydroxylase 4 82 288 - -
Vivi2g03438 295 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 288 IPR005123 -
Vivi2g03438 295 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 56 287 IPR045054 -
Vivi2g03438 295 SMART p4hc 90 287 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vivi2g03438 295 Pfam 2OG-Fe(II) oxygenase superfamily 174 287 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03438 Vivi-Chr2 140724960 140727765 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03438 K00472 - gmx:100811904 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03438 2 140724960 140727765 Vivi2g03438 2 140724960 140727765 ECH
Vivi2g03438 2 140724960 140727765 Vivi1g03915 1 82670790 82672984 PCT