Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03915 ATGAAAGGAAAAGTGAAAATCTCCAAATTGAAGTTGAGCATACCTATTTTGTGTCTTTGTTTATTTTTCTTCTTTCTTGGTCTATTTATGTCTCCTATCGTATTTCAGAATTGGGTTGATGAGGGATCCCATTTGAGAATTCACCAAGATTTTGTAAAGAAGGAATATGACCCTATTCAACATGGAAAATCTGGAGAATCCTTTGTTGAATCAATTCCGTTTCAGATTTTGAGTTTGAATCCAAGAGCTGTTTACTTTCCAAACTTCACAAGTGTAGAAACATGTGAGCAGATAATTGAAATGGCAAAGCCAACAGTTGAACCATCAAAGCTAGCTTTGCGAAAAGGAGAAGATGCAGAGAGCACAAAAGGCACAAGAACAAGTTCAGGCGTATTCATCGGTGCATCAGAAGATAAATCTGGCATTTTGGATATGATTGAGAGGAAAATCGCTAAGGTTACAATGATTCCAAAGACATATGGAGAAGATTTCAATATATTGAGGTATGAAGTTGGCCAAAAATATGATTCTCATTATGACGCTTTCGATCCAGCTGAGTATGGCCATGTTGATAGCCAAAGGGTTGCTTCCTTCTTATTATACTTATCAAATGTAGAAATGGGAGGAGAAACAATGTTCCCTTATGAGGATGGTTTAAATGTTGATACAAATTATGATTACAAAAAATGCGTTGGTTTGAAGGTGAAGCCTAGACAAGGTGATGGACTTTTATTTTATTCGGTGTTTCCAAATGGAAAAATTGATAAGAATTCTCTTCATGGAAGTTGTCCTGTGATAAAAGGAGAGAAATGGGTCGCAACAAAGTGGATTAATGATAAACAACAACAGAGGCACTACTAG 861 0.3612 MKGKVKISKLKLSIPILCLCLFFFFLGLFMSPIVFQNWVDEGSHLRIHQDFVKKEYDPIQHGKSGESFVESIPFQILSLNPRAVYFPNFTSVETCEQIIEMAKPTVEPSKLALRKGEDAESTKGTRTSSGVFIGASEDKSGILDMIERKIAKVTMIPKTYGEDFNILRYEVGQKYDSHYDAFDPAEYGHVDSQRVASFLLYLSNVEMGGETMFPYEDGLNVDTNYDYKKCVGLKVKPRQGDGLLFYSVFPNGKIDKNSLHGSCPVIKGEKWVATKWINDKQQQRHY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03915 286 SMART p4hc 81 278 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vivi1g03915 286 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 61 278 IPR045054 -
Vivi1g03915 286 Gene3D q2cbj1_9rhob like domain 74 278 - -
Vivi1g03915 286 Pfam 2OG-Fe(II) oxygenase superfamily 165 278 IPR044862 -
Vivi1g03915 286 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 279 IPR005123 -
Vivi1g03915 286 FunFam Prolyl 4-hydroxylase 4 73 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03915 Vivi-Chr1 82670790 82672984 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03915 K00472 - gmx:100811068 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03915 1 82670790 82672984 Vivi1g03915 1 82670790 82672984 ECH
Vivi2g03438 2 140724960 140727765 Vivi1g03915 1 82670790 82672984 PCT