Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03379 ATGGAGGCACCACCAGCAGTAGCCGGCGGAAACCCCGCCCCCGACGACGTTTCCCAGGCGGAAACAGCGATATTACGATTGAAATTGGCGGTTTGGCAGCAATTTCAACACGTGCTCGACAAAACCACCCCGCACGTGCTACGGCGTTGGATAGGGTTTTCGGTTCTGGCTTTCCTCTACGTCGTCCGCGTCTACTTCTTGCAAGGCTTCTACGTCGTTTCATACGCTCTTGGCATTTATATCCTCAATCTCCTCATCGGTTTTCTCTCTCCTCAGGAAGATCCCGCCCTCGCCGCCGATGGTCCTACTCTTCCGACCAGAGCTTCCGATGAGTTCCGGCCGTTTGTTCGCCGACTCCCTGAATTCAAGTTCTGGTACTCAATCACGAAGGCATTTTGCCTTGCATTTGTGATGACTTTCTTTAGTGCGTTTGATATTCCAGTCTTCTGGCCAATACTCCTCTTCTACTGGGTGATCCTGTTCACGCTTACTATGAGGAAACAAATATCACATATGATCAAATACAGATATGTACCATTCACATTTGGGAAACAGCACTATCAGGGAAAGAAACCATCGGCAGAAGAAAGCACAAGTCTTCCCGTGGACTGA 612 0.4984 MEAPPAVAGGNPAPDDVSQAETAILRLKLAVWQQFQHVLDKTTPHVLRRWIGFSVLAFLYVVRVYFLQGFYVVSYALGIYILNLLIGFLSPQEDPALAADGPTLPTRASDEFRPFVRRLPEFKFWYSITKAFCLAFVMTFFSAFDIPVFWPILLFYWVILFTLTMRKQISHMIKYRYVPFTFGKQHYQGKKPSAEESTSLPVD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03379 203 PANTHER PROTEIN RER1 15 194 IPR004932 GO:0016020
Vivi2g03379 203 Pfam Rer1 family 30 188 IPR004932 GO:0016020
Vivi2g03379 203 PIRSF AtER_Rer1p 11 198 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03379 Vivi-Chr2 138805493 138807663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03379 11 197 Miscellaneous Gene Families AT4G39220 60.317 2.26e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03379 - - gmx:100805147 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03379 2 138805493 138807663 Vivi2g03379 2 138805493 138807663 ECH
Vivi2g03379 2 138805493 138807663 Vivi1g02817 1 61125798 61128497 PCT