Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02817 ATGAACGCGGAAGACGCATCTCCGGCAGCGGCCATAACGCGGTGGAAGTTCGAGGCATCACGGCGGTACCAACACATTCTCGATAAATCAACGCCGCACGTCGGGCAGCGATGGCTGGGTTGCCTCGTGGTTGCGTTGGTTTACGTGCTTCGTGTTTACATGGTGCAAGGCTTCTACGTTGTATCGTACGCTCTCGGCATTTACATCCTCAACCTCTTGATCGGATTCCTTTCGCCTCAGGTTGATCCGGAGATTCTCGATGCTGATCATGGGCCTTCGCTTCCTACCTCCGGTTCGGATGAGTTTCGTCCGTTTGTTCGTCGTTTACCTGAGTTTAAGTTCTGGTACTCAATCACAAAGGCATTTTGCATTGCGTTTGTGATGACTTTCTTCAGTGCGTTTGATGTCCCCGTGTTTTGGCCAATACTCCTGTTCTATTGGGTGGTTCTATTCACACTTACTATGAGGAGACAAATAGCTCACATGATCAAGTACAAATATGTACCATTCTCATTTGGAAAACAGCGCTATGATGGGAAGAGAGCATCAGCAGAAAGCACTAGACTTTCAGAGGACTGA 579 0.487 MNAEDASPAAAITRWKFEASRRYQHILDKSTPHVGQRWLGCLVVALVYVLRVYMVQGFYVVSYALGIYILNLLIGFLSPQVDPEILDADHGPSLPTSGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIAHMIKYKYVPFSFGKQRYDGKRASAESTRLSED 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02817 192 PANTHER PROTEIN RER1 4 184 IPR004932 GO:0016020
Vivi1g02817 192 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
Vivi1g02817 192 Pfam Rer1 family 16 177 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02817 Vivi-Chr1 61125798 61128497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02817 2 185 Miscellaneous Gene Families AT4G39220 69.565 1.11e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02817 - - qsa:O6P43_033854 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02817 1 61125798 61128497 Vivi1g02817 1 61125798 61128497 ECH
Vivi2g03379 2 138805493 138807663 Vivi1g02817 1 61125798 61128497 PCT