Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03142 ATGCAACCCTCATATTGTGTGAAGGAGAATAAACCCTGTGTGGGTTGGGTTCAAAACTACTTCAGTGACTGTCTCTGCAATTTGAGTGATGATATCTCATTCACTTTTGGTTTCATCAGTTTAGTTTGTTGGGGTGTTGCTGAAATTCCTCAGATTATTACTAATTTTCGTGCTAAGTCTAGTCATGGTGTTTCTCTTGCTTTTCTTCTTACTTGGATTGCTGGAGATATATTCAACTTGGTGGGTTGTCTTTTAGAACCAGCTACGTTGCCAACTCAATACTACACAGCTCTGCTTTACACAATCACAACTATCGTATTAGTATTGCAAAGCTTCTATTATGATTACATCTATAAATGGTGCTGCAACCGTCGTCAAAAGATCAACGTCCAAGAGGGTTATGATGAGGAAGAGAAAAAACCATTGAAACCAAAACAAGCAGATGAGTCTGGGATTCCAATAAGAAGTGGCAAACACAGAACAATTAGTAGACCAGAGTATTACTATGGATCAGCAAGATCATTGGCCGGTAATATGACTCCGCCATCTCGAACATACATGAGAGTTGCTAAAAGTGGACCATCTGCAATGGGATTAGACGAAAATTCATCTTCCGATGACGAGGCGCATTCACCTCCTGCAACACAACCGAGACTAATCCCTCGTTCTGCGGGAAGCTATGGAACATTTCTAGCAACATCACTTAGCTTGCCTATGCAGAGTAATGCTTTGAAAGTGGGATACATAGCACTGACTGGAAGAAAACTACTCTCCCAAGAACATGTAACACACAGTGCATTAGGTCAATGGTTGGGATGGCTCATGGCTGCTATCTATACCGGTGGTCGAATACCTCAAATATGGTTAAATATTAAAAGAGGGAGTGTTGAGGGGTTAAATCCTTTCATGTTCCTCTTTGCACTGATTGCCAATGCCGCTTACGTGGGAAGTATTCTTGTAAGAACTACAGAATGGCAAAGTATCAAAGCAAATTTGCCATGGCTATTGGATGCAATAGTTTGCGTTGCATTGGACCTATTTATAATATTGCAGTACATCAATTACAGATACCATCGGAAGACAACTGCGAATGATGATTATGGTAACTATGAAAACCACAAAGAAGTGAGAAAAACTATTGTTTCTTGA 1149 0.4021 MQPSYCVKENKPCVGWVQNYFSDCLCNLSDDISFTFGFISLVCWGVAEIPQIITNFRAKSSHGVSLAFLLTWIAGDIFNLVGCLLEPATLPTQYYTALLYTITTIVLVLQSFYYDYIYKWCCNRRQKINVQEGYDEEEKKPLKPKQADESGIPIRSGKHRTISRPEYYYGSARSLAGNMTPPSRTYMRVAKSGPSAMGLDENSSSDDEAHSPPATQPRLIPRSAGSYGTFLATSLSLPMQSNALKVGYIALTGRKLLSQEHVTHSALGQWLGWLMAAIYTGGRIPQIWLNIKRGSVEGLNPFMFLFALIANAAYVGSILVRTTEWQSIKANLPWLLDAIVCVALDLFIILQYINYRYHRKTTANDDYGNYENHKEVRKTIVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03142 382 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 359 - -
Vivi2g03142 382 FunFam Vacuolar membrane PQ loop repeat protein 267 365 - -
Vivi2g03142 382 Gene3D - 33 127 - -
Vivi2g03142 382 Gene3D - 268 369 - -
Vivi2g03142 382 MobiDBLite consensus disorder prediction 133 156 - -
Vivi2g03142 382 SMART ctns 46 77 IPR006603 -
Vivi2g03142 382 SMART ctns 281 312 IPR006603 -
Vivi2g03142 382 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Vivi2g03142 382 Pfam PQ loop repeat 267 326 IPR006603 -
Vivi2g03142 382 Pfam PQ loop repeat 32 88 IPR006603 -
Vivi2g03142 382 MobiDBLite consensus disorder prediction 194 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03142 Vivi-Chr2 131873607 131877527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03142 K23678 - gmx:100815310 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03142 2 131873607 131877527 Vivi2g03142 2 131873607 131877527 ECH
Vivi2g03142 2 131873607 131877527 Vivi1g02971 1 64838406 64842411 PCT