Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02971 ATGGCACCCTCATACTGTGTGAATGAGAACAAAGAGTGTGTGAAATGGGTTGAAACATACTTCAAAGACTGTCTTTGCGATATGAGAGATGATATATCATTCAGTTTGGGAGTCATGAGTTTAGTATTATGGGGAGTTGCTGAAATTCCTCAGATTATTACTATTTTTCGCAACAAGTCAAACCATGGAATTTCCCTTGCATTTCTTGTCACTTGGGTTGCAGGAGACATATGCAACTTGGCAGGTTGCCTATTGGAACCAGCAACGTTACCTACACAGTTTTACACAGCAATGCTTTATGCAACCACTACTTTCATATTGCTACTCCAAAGCTTATACTATGATCACATCCTCACCTGGTGCAAACGTCGTCAGATCAAGACTAATGAAGAAGACAAAAGACTCCTGAAACCAAAACCTTCAGCAAACAAATTTATTCACGACTCATCTTCTGATGATGATGAAGAATCTTCTCAAGTTGCGTCTAAAATCGCTACAAACAAGCCTTGGTCCATACCATGTTCAATAGATAAATGTTATGGTACATTTCTAGCTACATCCATTATCTTGCCCTTGAAGGGTAATGCTATGAGAATTACTGGAATAAAGCTCTTTCAGGAGAGCGAGATACATAGTACATACGGACAATCTTTGGGATGGATCATGGCTGCTATCTATACATGTAGTAGGATTCCTCAAATACGGCTAAACATTAAAAGAGGCAGTGTGGAGGGCTTAAATCCTTTCATGTTCGTCTTTGCGTTGATTGCTAATGCCTCTTACGTGGGAAGTATTCTTGTAAGAACTACAGAATTGAAAAGCTTGAAAGCTAATATGCCATGGATGTTGGATGCCACAATTTGTGTAGCACTAGACATTTTTATAATATCACAGTACATCTACTATAGATACTTTCGCGGCAGAGAGGCGAGTAGTGATGATGAAGAATATTTGTTGAAGTAG 963 0.3894 MAPSYCVNENKECVKWVETYFKDCLCDMRDDISFSLGVMSLVLWGVAEIPQIITIFRNKSNHGISLAFLVTWVAGDICNLAGCLLEPATLPTQFYTAMLYATTTFILLLQSLYYDHILTWCKRRQIKTNEEDKRLLKPKPSANKFIHDSSSDDDEESSQVASKIATNKPWSIPCSIDKCYGTFLATSIILPLKGNAMRITGIKLFQESEIHSTYGQSLGWIMAAIYTCSRIPQIRLNIKRGSVEGLNPFMFVFALIANASYVGSILVRTTELKSLKANMPWMLDATICVALDIFIISQYIYYRYFRGREASSDDEEYLLK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02971 320 SMART ctns 46 77 IPR006603 -
Vivi1g02971 320 SMART ctns 228 259 IPR006603 -
Vivi1g02971 320 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 304 - -
Vivi1g02971 320 FunFam Vacuolar membrane PQ loop repeat protein 214 312 - -
Vivi1g02971 320 Pfam PQ loop repeat 32 88 IPR006603 -
Vivi1g02971 320 Pfam PQ loop repeat 215 269 IPR006603 -
Vivi1g02971 320 Gene3D - 35 125 - -
Vivi1g02971 320 Gene3D - 215 318 - -
Vivi1g02971 320 FunFam PQ loop repeat family protein 33 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02971 Vivi-Chr1 64838406 64842411 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02971 K23678 - gmx:100789634 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02971 1 64838406 64842411 Vivi1g02971 1 64838406 64842411 ECH
Vivi2g03142 2 131873607 131877527 Vivi1g02971 1 64838406 64842411 PCT