Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03136 ATGGTAACACCCATGGTCATCACTATTTTTCTCTCATTCCTCTTCTCTATTCATCATCATCATCATGTCACATGCACCACATCAACCACCACAACCACCACCACTACTCAACGCTTCAAACAAGCACCTAAATTTTACAATTCCCCAAACTGCCCCTCACAACCCACCGACGGCACGTGCTCCGACGAAGCCGTCCACGTCGCAATGACACTCGACGTAAAATACCTCCGCGGCTCCATGGCCGCGATTCTCTCCGTTCTTCAACACTCTTCATGTCCGGAAAACATCATCTTCCATTTCGTCACCGCCGCATCGAAATCCAAAACCTCCACAGTTATTCTCAACACTACACTCACGAACTCGTTTCCTTATTTAAAATTCCAAATATACCCCTTCGATGATGCTACTGTTGCCGGTTTAATCTCAACTTCAATCCGTTCGGCACTCGATTGTCCTCTCAACTACGCGCGAAATTACATGGCTAACCTTCTTCCTGATTGTGTTCGGAAGATCGTTTACCTTGACTCCGATCTGATCCTCATTGACGACATTGCGAAACTTGCTGCGACGCCGTTTACGAATGAGGCTGTTTTGGCTGCACCGGAGTACTGTAACGCGAATTTCAGTATCTATTTTACGCCGACGTTTTGGTCGAATCCTTCGCTTTCGATGACGTTTGCGAACCGGAAGGCTTGTTACTTCAACACCGGAGTAATGGTTATTGATTTGGAGAGATGGAGGGATGGAGGATATACGGAGCAGATTCAGGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTATGAGCTTGGTTCGTTGCCGCCGTTTTTGCTTGTTTTCGCCGGGAAAATAGTTCCGGTTGATCACCGGTGGAATCAGCATGGGCTCGGCGGTGATAATTTCCGTGGGCTTTGTAGAGGCTTGCATCCTGGGCCCGTTAGTCTTATGCATTGGAGTGGAAAGGGTAAACCGTGGGCCAGGCTTGATGCAAAACATCCTTGCCCTTTGGATGCTTTGTGGGACCCGTATGACCTTCTAGAAACACCTTTTGCTCTTGAAACCTAG 1065 0.4789 MVTPMVITIFLSFLFSIHHHHHVTCTTSTTTTTTTTQRFKQAPKFYNSPNCPSQPTDGTCSDEAVHVAMTLDVKYLRGSMAAILSVLQHSSCPENIIFHFVTAASKSKTSTVILNTTLTNSFPYLKFQIYPFDDATVAGLISTSIRSALDCPLNYARNYMANLLPDCVRKIVYLDSDLILIDDIAKLAATPFTNEAVLAAPEYCNANFSIYFTPTFWSNPSLSMTFANRKACYFNTGVMVIDLERWRDGGYTEQIQEWMELQKRMRIYELGSLPPFLLVFAGKIVPVDHRWNQHGLGGDNFRGLCRGLHPGPVSLMHWSGKGKPWARLDAKHPCPLDALWDPYDLLETPFALET 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03136 354 SUPERFAMILY Nucleotide-diphospho-sugar transferases 65 345 IPR029044 -
Vivi2g03136 354 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 66 334 IPR029044 -
Vivi2g03136 354 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 347 - -
Vivi2g03136 354 FunFam Hexosyltransferase 66 334 - -
Vivi2g03136 354 Pfam Glycosyl transferase family 8 66 327 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03136 Vivi-Chr2 131802437 131804109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03136 30 352 Glycosyltransferase AT3G50760 70.122 7.03e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03136 K20893 - gmx:100783054 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03136 2 131802437 131804109 Vivi2g03136 2 131802437 131804109 ECH
Vivi1g02973 1 64862153 64863585 Vivi2g03136 2 131802437 131804109 ECH
Vivi2g03136 2 131802437 131804109 Vivi1g02973 1 64862153 64863585 PCT