Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02973 ATGAAGTTCCAATTTGCATTATTCTTATTCTTATGTGTTAGTTTTATTCTCTACTTTTCCAAACAATCCTTATGCATTACCATTGAAGAAAGTTTCAAAGAAGCACCAAAATTCTACAACTCCCCTACATGCAAAACCATTGTATTCTTCCCTAGCAATCAACAATGCTCAATTGAAGCCGTACACGTGGCAATGACACTCGACGTGTCCTACATCCGCGGCTCCATGGCCGCAATCCTCTCCGTACTCCAACACTCATCATGTCCAGAAAACATTGTCTTCCATTTCATCGCCTCCTCTTCACAGCCTTCCTCAAAAACCGTTCTCAACAGAATCATAACTAACTCATTCCCGTATTTAAAATACCAAATCTACCCTTTCAACGACGATCCCGTCGCCGGATTGATTTCAACCTCCATCCGCTCCGCCCTCGACTGCCCTCTCAACTACGCTCGCACCTACCTCGCCGAGCTTCTCCCGGATTGTGTAACCAGAGTCGTGTACCTTGACTCCGACTTAATCCTCGTCGACGACATTGCGAAACTCGCTTCCACTCCTCTCCGTTCAAACACCGTCATCGCCGCACCAGAGTATTGCGGCGCGAATTTCAGTATTTATTTCACTTCGTTCTGGTCGAATCCTTCTCTTTCGCTCACATTCGCGAACCGTGAGGCGTGTTACTTTAACACCGGTGTTATGGTTATTGATCTTCAGCGGTGGCGTTCCGGTGAGTATACTACCATGATCCGGGAGTGGATGGAGTTGCAGAAGAGAATGCGGATCTATGAGCTGGGATCGTTGCCGCCGTTTTTGTTGGTTTTTGCGGGGAGGATTACGCCGGTGGATCATTGCTGGAATCAGCACGGGCTTGGAGGTGATAACTTTCGTGGGCTTTGTCGGGACCTGCACCCGGGCCCGGTGAGTTTGTTGCATTGGAGTGGAAAGGGAAAACCGTGGGCCAGGCTTGATGCTAATAGGCCTTGTCCTTTGGATGCTTTGTGGGCACCTTATGATTTGCTCAAAACTCGTTTTGCTCTTGAGTCATAG 1047 0.4814 MKFQFALFLFLCVSFILYFSKQSLCITIEESFKEAPKFYNSPTCKTIVFFPSNQQCSIEAVHVAMTLDVSYIRGSMAAILSVLQHSSCPENIVFHFIASSSQPSSKTVLNRIITNSFPYLKYQIYPFNDDPVAGLISTSIRSALDCPLNYARTYLAELLPDCVTRVVYLDSDLILVDDIAKLASTPLRSNTVIAAPEYCGANFSIYFTSFWSNPSLSLTFANREACYFNTGVMVIDLQRWRSGEYTTMIREWMELQKRMRIYELGSLPPFLLVFAGRITPVDHCWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLKTRFALES 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02973 348 FunFam Hexosyltransferase 62 328 - -
Vivi1g02973 348 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 340 IPR029044 -
Vivi1g02973 348 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 341 - -
Vivi1g02973 348 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 328 IPR029044 -
Vivi1g02973 348 Pfam Glycosyl transferase family 8 62 321 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02973 Vivi-Chr1 64862153 64863585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02973 1 346 Glycosyltransferase AT3G50760 66.572 7.63e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02973 K20893 - qsa:O6P43_018853 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02973 1 64862153 64863585 Vivi1g02973 1 64862153 64863585 ECH
Vivi1g02973 1 64862153 64863585 Vivi2g03136 2 131802437 131804109 ECH
Vivi2g03136 2 131802437 131804109 Vivi1g02973 1 64862153 64863585 PCT