Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03110 ATGAGTTCAATCATTGTTAATACATGGGTTACTCCCAATTCCATGTTCAGGCAGACAATCACAACCAAACACCAAACTCTCATTCCATTTCTAGCTATTCCCATTTCCTCAATCACCAATCAACAAAGAAGAAGAAATTTGGTTTCTTCTTTTTCCTCTAACAAAATCTCTGCCGTTCAAACTAGTGCAGACAAAAAAATCGAAAAAACGGAATCGAATTTCGATTTCAATGTCTACATGCTAGAAAAAGCTAATATTGTTAACAAAGCATTGGATGAATCAATTGTACTTCAAGAACCGGTGAAGATTCATGAAGCAATGAGATACTCTCTCCTCGCGGGAGGAAAACGTGTACGTCCAATTCTCTGTATTGCCGCCTGCGAGCTCGTAGGCGGCAAAGCAGAAACATCTATCCCATCAGCATGTGCTGTGGAAATGATCCACACTATGTCGTTGATCCATGACGACTTACCGTGCATGGACAACGACGATCTAAGACGTGGAAAGCCAACGAGCCACAAAGTCTACGGCGAGGACGTGGCAGTCCTTGCTGGAGACGCGCTGCTTTCGCTGGCTTTTGAGCACGTGGCCGTTTCAACCAAAGGGGTCCCACCTGAGAAAGTTGTTAGAGCAATTGCTGAGCTGGCGAAATCAGTTGGAAAAGAAGGACTTGTTGCTGGACAAATTGTCGATTTAGAATCGGAAGGTTTATCGAATGTCGATTTGGAGAGACTCGAGTTTATTCATCTGCGTAAAACCGCGGCTTTACTCGAAGCTTCGGTTGTTATGGGAGCAATAGTTGGTGGTGGAAGTGAAGATGAAATTGAAATTTTGAGAAAATTTGCCAGGTGTATTGGTTTGTTGTTTCAGGTTGTTGATGATATTCTTGATGTGACAAAATCTTCTGAGGAATTGGGGAAAACTGCAGGGAAGGATTTGGTTGCTGATAAGGTTACATATCCTAAGCTTTTGGGATTGGAAAAATCAAAGGAGTTTGCTGAAAAATTGGTTAAGGATGCACAAGATTGTCTTGTTGGTTTTAACTTTGAAAAGAGTGCTCCTTTGTTTGCTTTAACTAATTATATTGCTTATAGGCAAAATTAG 1104 0.4139 MSSIIVNTWVTPNSMFRQTITTKHQTLIPFLAIPISSITNQQRRRNLVSSFSSNKISAVQTSADKKIEKTESNFDFNVYMLEKANIVNKALDESIVLQEPVKIHEAMRYSLLAGGKRVRPILCIAACELVGGKAETSIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKVYGEDVAVLAGDALLSLAFEHVAVSTKGVPPEKVVRAIAELAKSVGKEGLVAGQIVDLESEGLSNVDLERLEFIHLRKTAALLEASVVMGAIVGGGSEDEIEILRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGLEKSKEFAEKLVKDAQDCLVGFNFEKSAPLFALTNYIAYRQN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03110 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 48 367 - -
Vivi2g03110 367 Pfam Polyprenyl synthetase 103 335 IPR000092 GO:0008299
Vivi2g03110 367 SFLD Polyprenyl Transferase Like 80 365 - -
Vivi2g03110 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Vivi2g03110 367 SFLD Isoprenoid Synthase Type I 80 365 - -
Vivi2g03110 367 Gene3D Farnesyl Diphosphate Synthase 73 367 IPR008949 -
Vivi2g03110 367 FunFam Geranylgeranyl diphosphate synthase 73 367 - -
Vivi2g03110 367 CDD Trans_IPPS_HT 103 365 IPR000092 GO:0008299
Vivi2g03110 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Vivi2g03110 367 SUPERFAMILY Terpenoid synthases 79 343 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03110 Vivi-Chr2 131242256 131243392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03110 K13789 - gmx:100778289 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03110 2 131242256 131243392 Vivi2g03110 2 131242256 131243392 ECH
Vivi1g02981 1 65118444 65119964 Vivi2g03110 2 131242256 131243392 ECH
Vivi2g03110 2 131242256 131243392 Vivi1g02981 1 65118444 65119964 PCT