Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02981 ATGAGTGCTGTGAATCTTAACACATGGACACACTCCAATTTCATGTTCAATCAAGTTACTGCTACCAGATTCAGATCCAGATCCACATCCCCATCTTTCTACTTTACCAAAATACCCTCCACCATTAAACCACAACAAACCCATAACCAATTCATGAACTCCAACTCTTCCTTCTCCGTTTCAGCTTTGCTCACTAAACAAGAAACAATCGAAACCGAAGAGAAACCAGTTTTCGATTTCAAATCCTACATGATCGAAAAAGCTACTAGGGTTAACAAAGCCCTAGACGACGCCGTTTCGTTACGCGAGCCTCTCAAAGTCCACGACGCTATGAGATACTCTCTCCTCGCCGGCGGGAAGCGCGTCCGCCCCGTTCTCTGCTTAGCCGCTTGCGAACTCGTCGGAGGCACCGAATCCATGTCGATGCCGGCCGCCTGCGCCGTCGAAATGATCCACACTATGTCGCTCATCCACGACGACCTCCCTTGTATGGACAACGACGATCTCCGCCGCGGAAAACCGACTAATCACAAAGTCTACGGAGAAGACGTCGCGGTTCTCGCCGGAGACGCGTTACTCGCTTTCGCCTTCGAGCATATTGCCGTTTCTACATCCGGCGTTTCTCCGGCGAGAATCGTCCGCGCAATCGGAGAGCTCGCGAAGTCGATCGGCTCCGAAGGACTCGTCGCCGGTCAAGTCGTCGATATAAACTCCGAAGGTTTATCCGATGTGGGAATAGAGAGGCTCGAGTTCATTCACCTCCATAAAACCGCTGCGTTGTTAGAAGGTGCCGTAGTTCTCGGTGCGATTCTCGGTGGTGGTTGCGATGAAGATGTTGAAAAACTGAGAAAATTTGCTAGGTATATAGGTTTATTGTTTCAGGTTGTTGATGATATTCTTGATGTCACGAAATCTTCGCAAGAATTAGGTAAAACGGCTGGGAAAGATTTGGTGGCTGATAAAGTTACTTATCCAAAGCTTTTGGGGATTGAAAAATCTAAAGAATTTGCTGAGAAATTGAACAGGGATGCACAGGATCAGCTTTCTGGATTTGATTCTAGGAAAGCTGCTCCTTTGATTGCTCTGGCTAATTACATTGCCTATAGGCAAAACTAA 1116 0.4758 MSAVNLNTWTHSNFMFNQVTATRFRSRSTSPSFYFTKIPSTIKPQQTHNQFMNSNSSFSVSALLTKQETIETEEKPVFDFKSYMIEKATRVNKALDDAVSLREPLKVHDAMRYSLLAGGKRVRPVLCLAACELVGGTESMSMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIAVSTSGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGIERLEFIHLHKTAALLEGAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQDQLSGFDSRKAAPLIALANYIAYRQN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02981 371 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 3 371 - -
Vivi1g02981 371 Gene3D Farnesyl Diphosphate Synthase 77 371 IPR008949 -
Vivi1g02981 371 SFLD Isoprenoid Synthase Type I 83 369 - -
Vivi1g02981 371 SUPERFAMILY Terpenoid synthases 80 354 IPR008949 -
Vivi1g02981 371 FunFam Geranylgeranyl diphosphate synthase 77 371 - -
Vivi1g02981 371 Pfam Polyprenyl synthetase 108 340 IPR000092 GO:0008299
Vivi1g02981 371 ProSitePatterns Polyprenyl synthases signature 1. 156 172 IPR033749 -
Vivi1g02981 371 CDD Trans_IPPS_HT 107 369 IPR000092 GO:0008299
Vivi1g02981 371 ProSitePatterns Polyprenyl synthases signature 2. 289 301 IPR033749 -
Vivi1g02981 371 SFLD Polyprenyl Transferase Like 83 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02981 Vivi-Chr1 65118444 65119964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02981 K13789 - gmx:100785539 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02981 1 65118444 65119964 Vivi1g02981 1 65118444 65119964 ECH
Vivi1g02981 1 65118444 65119964 Vivi2g03110 2 131242256 131243392 ECH
Vivi2g03110 2 131242256 131243392 Vivi1g02981 1 65118444 65119964 PCT