Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02733 ATGGAGGTTGTGATTATTGCTCTTGCTGCTACTCTTGGGAATCTTCTTATTGGATGGGATAGTTCCACCATTGCAGGGGGTATGACCTACATCAAACAAGAATTTGAATTGGAAAAGGATCCAACACTTGAAGGGTTAATTGTGTCCATGTCTTTTATAACTGGAACTGTTGTCACCATTTTTTCTGGAACAATATCTGATATGGTTGGGAGAAGGCCTATGTTGATAACATCATCTGTAATGTTTTTTGTTGCTGGTTTGGTAATGTTTTGGGCTCCTAATGTTACTGTTGTTCTGTTGTCGAGGATAATCGAAGGCGTTGCCATTGCTCTTGCTGTTACTTTTAATCCTCTTTATATATCTGAGATAGCACCACCTGATATAAGAGGACAGTTGAACACTCTTACTCAGTTCGCTTGTTCTGGTGGAATGTTTTTGGCTTACATTCTTGTTTTCTCGATGTCCTTGTTGCAATCGCCTAGTTGGAGAGTTATGCTTAGTGTTATTTCTATTCCGTCTGTTGTTTATTTTTTGCTCACTGTGTTTTATCTCCCCGAATCTCCTCGGTGGCTTGTAAGCAAAGGTCGAATTGTTGAGGCCGAGAAAGTTTTGAAAAGACTTCGCCGCGTTGATGATGTCTCAGGGGAGATGGCTTTGCTCGCGGAGGGTCTCAATCCTGGGGGTGAAGACATATCCATAGAAGAATATGTAGTTGCTCCGGCTAGTGAGATCCTTGTCAACCAAGAAGCAGGAAAAGATTATATAAAATTATATGGACCTAATGAGGGAGTTACAATGATTGCTCAACCTGTGGATGGGCAAGGCAGCATGCTATCGCGCAGTATGTTGTCTATGCATGGAAACTATGCATCGCGCAGTATGTTGTCTCAGCAGGGAAGCTTTTCATCTCAAGCAGTTGCTAATCTCAAAGATCCTATTGTCAACCTATTTGGAAGTTTGCACGAGAGTACTCTCATCGAGAGCGGTCGTTCGAACAGCATGTTGATTAACAATGCTAATAGTATCTTTAGCACGGGAGATCCAGAGGCTAGCCCATTCGGTACAAGTGACAACCTGCGTGCTCCATTGAATCCATATCATGGTGGAGCTGATAGAGGTTATGGATCTAAGGACATGTTAGGTATGAGAAGCAATAGCAGTTTGGTTCATGGACATGATGAAACACCAAGAAATACAGATATCGGTGGAGGTTGGCAATTGGTTTACAAATCAACTGATGATGCAATGGGTGGGAAAAGAGAAGGACTCCAAAGGGTTTATTTGCATGCAGATCCTTCAGCTGCTGCAGTGTCTCAGTCTCCGCATGTTTCATTTGTTGGAACTTCTGGCTATGACATGCATATAGATGGTGGCGAAGCTTTTCAGGCCGCTGGTATTGTCAGCCGGTCAGTTCTTGGAACTAGTGATGCGTTGAGTATACCGGAAGTCGCTGCAAAAGGTCCGAAGTGGAGAGCTCTTCTAGAACCAGGTGTCAAGCGCGCATTAATTGTTGGAATAGGACTTCAAATTCTTCAACAGGCTGCTGGCATAAATGGATTTCTATACTATGCTCCTCAGATTCTTGAGCAGGCAGGAGTAGGAGCTCTTCTATCAAGTTTAGGCATCAGTTCAATATCTGCTTCTTTTCTTGTAAATATCATTACGACATTCTGTATGCTTCCTTGCATATTTATTTCCATAAGGCTCATGGATGTTGCTGGCAGAAGGTCAATCATGCTGTACACAATACCGATTTTGATAGTATGTCTCCTAGTACTAGTACTGAAGCAGTATTTTCAACTCAGCTCTGTCCTAAATGCATCAATTTCAGCTATCAGTGTTGTGGTATATGAAAGCGTGTTCTGCATGGGTCTTGGTATTATTCCCAACATCATATGTGCAGAAATCTTCCCGACCAGTGTTCGCGGAATCTGCATTTCACTTACTTCTCTTACTTATTGGGTTTGTACATTGGCTGTCACATTGACATTCCCTTATTTGCTCCAAATTCTCGGTCTCAGCGGCGTATTTGCTTTATTTGTTGGTGGCTGCATCATTTCGTTGATATTTGTTTACTTGAAAGTTCCTGAAACAAAGGGTATGCCTTTGGAAGTTATTATCGAGTTTTTTGCCATTGGTGCAAAGCCTGGTACTGATCCTGCAGAATTAGGAATGAAAGATTAA 2184 0.4212 MEVVIIALAATLGNLLIGWDSSTIAGGMTYIKQEFELEKDPTLEGLIVSMSFITGTVVTIFSGTISDMVGRRPMLITSSVMFFVAGLVMFWAPNVTVVLLSRIIEGVAIALAVTFNPLYISEIAPPDIRGQLNTLTQFACSGGMFLAYILVFSMSLLQSPSWRVMLSVISIPSVVYFLLTVFYLPESPRWLVSKGRIVEAEKVLKRLRRVDDVSGEMALLAEGLNPGGEDISIEEYVVAPASEILVNQEAGKDYIKLYGPNEGVTMIAQPVDGQGSMLSRSMLSMHGNYASRSMLSQQGSFSSQAVANLKDPIVNLFGSLHESTLIESGRSNSMLINNANSIFSTGDPEASPFGTSDNLRAPLNPYHGGADRGYGSKDMLGMRSNSSLVHGHDETPRNTDIGGGWQLVYKSTDDAMGGKREGLQRVYLHADPSAAAVSQSPHVSFVGTSGYDMHIDGGEAFQAAGIVSRSVLGTSDALSIPEVAAKGPKWRALLEPGVKRALIVGIGLQILQQAAGINGFLYYAPQILEQAGVGALLSSLGISSISASFLVNIITTFCMLPCIFISIRLMDVAGRRSIMLYTIPILIVCLLVLVLKQYFQLSSVLNASISAISVVVYESVFCMGLGIIPNIICAEIFPTSVRGICISLTSLTYWVCTLAVTLTFPYLLQILGLSGVFALFVGGCIISLIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPAELGMKD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02733 727 Pfam Sugar (and other) transporter 489 707 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 Pfam Sugar (and other) transporter 7 223 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 FunFam Monosaccharide-sensing protein 3 1 248 - -
Vivi2g02733 727 Gene3D MFS general substrate transporter like domains 474 712 IPR036259 -
Vivi2g02733 727 Gene3D MFS general substrate transporter like domains 2 247 IPR036259 -
Vivi2g02733 727 ProSitePatterns Sugar transport proteins signature 1. 62 79 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PRINTS Sugar transporter signature 14 24 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PRINTS Sugar transporter signature 611 632 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PRINTS Sugar transporter signature 634 646 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PRINTS Sugar transporter signature 99 118 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PRINTS Sugar transporter signature 512 522 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 3 711 - -
Vivi2g02733 727 SUPERFAMILY MFS general substrate transporter 6 704 IPR036259 -
Vivi2g02733 727 ProSitePatterns Sugar transport proteins signature 1. 566 582 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi2g02733 727 FunFam Monosaccharide-sensing protein 3 469 712 - -
Vivi2g02733 727 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 699 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02733 Vivi-Chr2 122558518 122561557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02733 50 715 Organic Solute Cotransporters AT3G51490 50.647 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02733 - - gmx:100788445 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02733 2 122558518 122561557 Vivi2g02733 2 122558518 122561557 ECH
Vivi1g03264 1 70902987 70906865 Vivi2g02733 2 122558518 122561557 ECH
Vivi2g02733 2 122558518 122561557 Vivi1g03264 1 70902987 70906865 PCT