Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03264 ATGAGGGAGGTTATTATGGTTGCAACTGCTGCTACACTTGGGAATCTGTTGTTTGGATGGGATAGTTCAACCGTTGCAGGTGGAATGAGATACATCAAACATGAATTCCACTTAGAATCTGATCCATCACTAGAAGGACTAATAGTATCCATGTCATTTTTAACCGGAACAATCGTAACGATATTCTCCGGCACAGTTTCCGATATGATCGGAAGGCGTCCGATGTTAATAACATCATCTCTCATGTTTTACTTTAGTGGTCTGGTCATGTTGTGGGCTCCGAATGTTCCGGTGATTTTATTTTCAAGGCTATTGAGTGGAATTGGAATTGCATTAGCCATGACTATAACTCCTCTTTACATATCTGAGATAGCGCCGCCTGATATCAGAGGCTTACTCAACACTCTCCCTCAGCTTTCATGCTCTATGGGAATGTTCTTGGCTTATCTCTTGGTTTTCACTATTTCCTTGACGGAATTGCCGAGTTGGCGAGGCATGCTTTCTGTGGTTTCTGTTTATTCTGTAGTTTATTTTTTTCTCGCCGTGTTTTATCTCCCCGAATCTCCTCCTTGGCTTGTCAGTAAAGGTAGAATATCTGAAGCTAAGAGAGTTCTGCAAAGAATTCGCCTCGTTGAAGATGTTTCAGGAGAATTAGCTTTGTTAGCTGAGGGAATGAATCCTGGAGGTGAATCCATTATTGTAGAAGAATACATAGTTGCACCAGCAAGTGAACTCATTTCATACAAGGAAGCAGGAAAAGATTGTATTAAGCTTTATGGACCTAATCAAGGAGAAGTTTCAATGATTGCGCAACAAGTAACTGGACAAGGTAGTGTGTTAACGCCCGAGGGAAGCATGTTTTCCAATGCTTCTTCCAATCTTAAGGACAATATTGTCAATATATTTGAAAGCATGCACGGAAATATTCCCAAAATGTCGAGTACAAGTCATATGGGAGATCAAGATAGTGACAACGTGCACGCTCTATTACTTCCACCTCAAGGTAGTGCTATGGAGAAGGACAAAAGTAATGCTGGAGAAATACCGATGAACACAGACATTGGTGGAGGTTGGCAATTGGCTTATAAATCAATTGAAGCGACGAATGGTGAAGGTGGATTGCAAAGGGTTTATCTGCATGCAGATTCTAGTGCAGTGTCACGGCAAGGTTCTGCTTCAACCTCTTTTCATGACTTGAATGCAGATCAAGATGGTGAAACTTTTCAGGCAGCTGCACTTGTTTGTGATTCAATTCATATTAATAAGGATATGAAGATTAAACCAGAATTTACTCCGAAACGTACAAGTTGGAAAGATTTGTTAGACCCTGGTGTAAAAAGAGCATTAGTAGTTGGAATAGGGCTTCAAGTTCTTCAGCAGGTTTCTGGTATAAGTGGATTTGTATACTATGCTCCTCAAATTCTTGACCAAGCAGGAGTTGGAGCACTTTTGTCAGATTTAGGGATTAGTTCAGCATCTTCTTCTATATTTGTAAATGTCATAACAACATTCTGCATGCTTCCTTGTATAGCTCTTACCATGAGTGTGATGGATATATCAGGAAGGAGGTCAATATTGTTATACACAATACCAATTCTAATAGCATCTCTCATGATACTAATACTCAAAGACTTATTTCACCTAAGTTCAACCATGAATGCAGCATTAACAGCAATTTGTGCTATAGTATATGAAAGCATATTCTGCATGGGTTATGGAGTAATACCGAATATTATATGTTCAGAAATATTTCCAACAAGTGTACGCGGGTTATGTATTTCGATTTGTTCACTTACATATTGGATATCTACCTTGATCATCACTTCCATATTTCCATTCTTGCTTCAATTCCTTGGTACTACTGGTGTGTTTGGATTGTTTGTTGCTGGTTGCATTGCATCTTGGATTTTTATTTACTTGAAAGTTCCTGAAACAAGGGGTATGCCTTTAGAAGTTATCGTTGAGTTTTTCGCTATTGGTTCAAAGCCTGAAACGCGTTGA 2001 0.3928 MREVIMVATAATLGNLLFGWDSSTVAGGMRYIKHEFHLESDPSLEGLIVSMSFLTGTIVTIFSGTVSDMIGRRPMLITSSLMFYFSGLVMLWAPNVPVILFSRLLSGIGIALAMTITPLYISEIAPPDIRGLLNTLPQLSCSMGMFLAYLLVFTISLTELPSWRGMLSVVSVYSVVYFFLAVFYLPESPPWLVSKGRISEAKRVLQRIRLVEDVSGELALLAEGMNPGGESIIVEEYIVAPASELISYKEAGKDCIKLYGPNQGEVSMIAQQVTGQGSVLTPEGSMFSNASSNLKDNIVNIFESMHGNIPKMSSTSHMGDQDSDNVHALLLPPQGSAMEKDKSNAGEIPMNTDIGGGWQLAYKSIEATNGEGGLQRVYLHADSSAVSRQGSASTSFHDLNADQDGETFQAAALVCDSIHINKDMKIKPEFTPKRTSWKDLLDPGVKRALVVGIGLQVLQQVSGISGFVYYAPQILDQAGVGALLSDLGISSASSSIFVNVITTFCMLPCIALTMSVMDISGRRSILLYTIPILIASLMILILKDLFHLSSTMNAALTAICAIVYESIFCMGYGVIPNIICSEIFPTSVRGLCISICSLTYWISTLIITSIFPFLLQFLGTTGVFGLFVAGCIASWIFIYLKVPETRGMPLEVIVEFFAIGSKPETR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03264 666 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 646 IPR020846 GO:0022857
Vivi1g03264 666 Gene3D MFS general substrate transporter like domains 2 306 IPR036259 -
Vivi1g03264 666 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 PRINTS Sugar transporter signature 581 593 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 PRINTS Sugar transporter signature 459 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 PRINTS Sugar transporter signature 558 579 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 Gene3D MFS general substrate transporter like domains 387 659 IPR036259 -
Vivi1g03264 666 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 658 - -
Vivi1g03264 666 SUPERFAMILY MFS general substrate transporter 10 651 IPR036259 -
Vivi1g03264 666 Pfam Sugar (and other) transporter 429 655 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 Pfam Sugar (and other) transporter 7 225 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi1g03264 666 FunFam Monosaccharide-sensing protein 3 416 659 - -
Vivi1g03264 666 FunFam Monosaccharide-sensing protein 3 2 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03264 Vivi-Chr1 70902987 70906865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03264 14 662 Organic Solute Cotransporters AT4G35300 47.420 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03264 - - psat:127136838 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03264 1 70902987 70906865 Vivi1g03264 1 70902987 70906865 ECH
Vivi1g03264 1 70902987 70906865 Vivi2g02733 2 122558518 122561557 ECH
Vivi2g02733 2 122558518 122561557 Vivi1g03264 1 70902987 70906865 PCT