Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01992 ATGAAGAAATTGTATGGAGGAGTTCTGATTGCCTCAGCGTTTACACTTTTTATGCTTATGATCCTGCGTTACGGGGTCATGAAAAATCCTATTAGTGAAGGTTATTTGACCATACCTGTCTCTATAAATGGTACTAATCCTCTAGAATGGATAAATCCTGTGATTCCGCCTGCTATTCAAAACCCAGATGGTACTTCTCAAGTTATTTCTGCAGACATTTTAGTATCTAGCCTCTTTGCTAAGAACAGCTTTTCCAAAAAAGAACAACAAACTCTGCAAACATGGAACCACTTGAAGCACTTAATTGGTCATGTTCAGGGTTTACCTAGTGCAGCAGAAGCTATCAAGGAAGCTGCCAATGCATGGAATAGTCTTGTATCTTCAGTTGAAGAGCAAAAGCAAGGTCATGCAAATGATAGTTCAAGAGCAAAAGAGAAACAGTGTCCCCATTTTCTTAATAAAATGAATTCTTCCGAACTTGGTAATAGTAGTTACAAACTGCAAGTACCTTGTGGTCTGACGCAAGGTTCTTCCATTACTGTAATTGGCACTCCGAATGGTATTCTAGGTAATTTTCGGATAGACCTGACTGGAGAACCAATCCCTGGGGAGCCTGATCCTCCAGTTATCTTGCACTACAATGTTAGGCTTCATGGTGATAAAATCACCGAAGATCCAGTAATTGTCCAAAACACTTGGACATTAGCTCATGATTGGGGTGAAGAGGAACGCTGTCCATCCCCTGGTTCTGAAGAGGTTAAGAAAGTTGATGAGCTGGAACAGTGCAATAAGATTGTAGGCAAGAATATTAGCCAACTTTACATAGGCGGTATGCATTCTCACACTTCAAGACAAATTTCAGCAGCTGAAGAGCAATCAATTAAGAGAAAATACTTTCCTTTTAAGCAAGGTTACCCATTTGTCGCAACTATTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAGCATATTACTTCATTTGCTTTCCGCGAAACCTTGGAGCCATGGCTTGTCAGTGAGATAAAAATTTCAGGGGACATAAAATTAGCATCCATTCTTGCTAGTGGTCTGCCTACATCAGAGGATTCAGATCATATTGATGATTTGGAACTATTGAAATCAAGTCCTCTATCTGCACAGGCCCCGTTGGATCTCTTCATTGGTGTTTTCTCTACAGCAAACAATTTTAAGCGACGGATGGCTGTTAGAAGAACCTGGATGCAGTATAATGCAGTTAGATCAAATACAACGGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCAAATAGTTAATGAAGAATTATGGAGAGAAGCACAAACATATGGAGACATACAGTTGATGCCGTTTGTTGACTACTACAGCCTCATAACCTGGAAGTCTTTAGCAATCTGCATTTTTGGGGTTGTTTCAGCAAAGTTTATCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATGAAGTGCTAGGCTCTTTGCAGAGGATCAATGTGGCTCATGGGTTGCTATACGGACTCATCAATTCTGATTCACAGCCTCATCGAAATCCTGATAGCAAATGGTACATCAGTACAGAGGAATGGCGCGAAGAAAGTTATCCTCCATGGGCACATGGTCCCGGCTATGTGATCTCACATGACATAGCAAAGGCAGTCTACAAGAAATACAAAGAGAATCATTTGAAGATGTTTAAATTAGAAGATGTTGCAATGGGAATCTGGATCGCAGAAATGAAGAAGGAAGGTCTAGAAGTTCGATACGAAAATGAGGGCAGAGTTTATAATGAGGGTTGCAAGGATGGTTATGTGGTTGCCCATTATCAAGGTCCAAGGGAGATGCTATGTTTGTGGCACAAACTTCAGGAATTAAAACGTGCAACATGCTGCGGTGATAGGAGGTAA 1911 0.4087 MKKLYGGVLIASAFTLFMLMILRYGVMKNPISEGYLTIPVSINGTNPLEWINPVIPPAIQNPDGTSQVISADILVSSLFAKNSFSKKEQQTLQTWNHLKHLIGHVQGLPSAAEAIKEAANAWNSLVSSVEEQKQGHANDSSRAKEKQCPHFLNKMNSSELGNSSYKLQVPCGLTQGSSITVIGTPNGILGNFRIDLTGEPIPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTLAHDWGEEERCPSPGSEEVKKVDELEQCNKIVGKNISQLYIGGMHSHTSRQISAAEEQSIKRKYFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDIKLASILASGLPTSEDSDHIDDLELLKSSPLSAQAPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNTTAVRFFVGLHKSQIVNEELWREAQTYGDIQLMPFVDYYSLITWKSLAICIFGVVSAKFIMKTDDDAFVRVDEVLGSLQRINVAHGLLYGLINSDSQPHRNPDSKWYISTEEWREESYPPWAHGPGYVISHDIAKAVYKKYKENHLKMFKLEDVAMGIWIAEMKKEGLEVRYENEGRVYNEGCKDGYVVAHYQGPREMLCLWHKLQELKRATCCGDRR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01992 636 CDD GLECT 165 355 IPR001079 GO:0030246
Vivi2g01992 636 Pfam Galactosyltransferase 400 582 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi2g01992 636 Gene3D - 380 602 - -
Vivi2g01992 636 Gene3D - 158 356 - -
Vivi2g01992 636 SMART galectin_3 165 358 IPR001079 GO:0030246
Vivi2g01992 636 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Vivi2g01992 636 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Vivi2g01992 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Vivi2g01992 636 FunFam Beta-1,3-galactosyltransferase GALT1 379 606 - -
Vivi2g01992 636 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Vivi2g01992 636 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 339 589 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01992 Vivi-Chr2 93471231 93477412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01992 1 632 Glycosyltransferase AT1G26810 63.240 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01992 K14413 - gmx:100780913 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01992 2 93471231 93477412 Vivi2g01992 2 93471231 93477412 ECH
Vivi1g00947 1 19934398 19940069 Vivi2g01992 2 93471231 93477412 PCT