Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01309 ATGGTTTCCCCACATCAAAGCCCCGAAGAAGAAGCACCTATCCATGGCGATGTTTTAGAAGCCATATTCTCGCTCGTGCCACTCATCCATCTTGTTCCATCTTGCCACGTGTCAAAAGCTTGGAACAGTGCTGTCTTCTCATCACTCTCCCACGTTAAACAAATCAAACCATGGCTCATAATTCTCTCCCAGACAACACTCTCTTCGCGCGTGAACATCGCTCACGCTTACGACCCTCGCTCCCACTCGTGGCTTAAGATAATCAAACACCAGCCGTTGATCAATAAGCCTTGTGAAATTCCAACCGTTAGATCATCCCATTCAACTCTGCTTTACACGATAACCCCTTCGGAATTTACTTTTTCACTCGACGCGCTTCATCTCGACTGGCACCAAGCGCCTGCTCCGCGCGTGTGGAGAGTGGATCCAATAGTAGCGCGCGTTGGTAAGCGCGTGGTTGTTTCTGGTGGCGCGTGTGACTTCGAGGATGATCCTCTTGCTGTTGAGATGTACGATATGGAGAATCGCGATTGGATCATGTGTCCTTCGATGCCTGCAATGCTTAAGAGCGCGTCAGCGTCCATGTGGATATCAGTCGCCGTCGTCGGAGAAACGGTTTACTTGACGGAGAAGAATTCCGGTTTGACGTACTCATTCCATTCTGTTATGAAGGTTTGGGAAGGACCGTACGATCTACGTCCTGATGAGAGCGTGTTCTACTCCGTTACCGGTACGTTGTCGGAGAAACTAACGGTGGCCGGATTGGTGGGTGAACCGGGGAACGTGAGGGAAGTAAAACTATGGGCGGTTAAGGAGGAATTAGGTTCGGGAATGGAGGAAATAGGTTCGATGCCGAAGGAGATGGTGGAGAAGTTAAAAGGTGATTCGGAGTTTGGTTCGGTGGAAGTGGTTTGGGTTGGTAATTTTGTTTACTTGCGGAACACGTTAGTACTTGAGGAACTTGTTGTGTGTGAGGTTGTGGATGGGAAGATGTGTGAGTGGAGGAGTGTTAAGAACGCGGCGGTGGACGGCGGAACGAGGATGGTGTTATGCGGCGGTGATGTGCGGATGGAGGATTTGCAAAGAGCGGTTATGTCGGAGAAACAGACATTTTGCATGAAACAACTTGAAATGTAG 1137 0.496 MVSPHQSPEEEAPIHGDVLEAIFSLVPLIHLVPSCHVSKAWNSAVFSSLSHVKQIKPWLIILSQTTLSSRVNIAHAYDPRSHSWLKIIKHQPLINKPCEIPTVRSSHSTLLYTITPSEFTFSLDALHLDWHQAPAPRVWRVDPIVARVGKRVVVSGGACDFEDDPLAVEMYDMENRDWIMCPSMPAMLKSASASMWISVAVVGETVYLTEKNSGLTYSFHSVMKVWEGPYDLRPDESVFYSVTGTLSEKLTVAGLVGEPGNVREVKLWAVKEELGSGMEEIGSMPKEMVEKLKGDSEFGSVEVVWVGNFVYLRNTLVLEELVVCEVVDGKMCEWRSVKNAAVDGGTRMVLCGGDVRMEDLQRAVMSEKQTFCMKQLEM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01309 378 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 14 325 - -
Vivi2g01309 378 SUPERFAMILY Kelch motif 59 353 IPR015915 GO:0005515
Vivi2g01309 378 Gene3D - 51 291 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01309 Vivi-Chr2 56242171 56243600 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01309 - - gmx:100819427 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01309 2 56242171 56243600 Vivi2g01309 2 56242171 56243600 ECH
Vivi2g01309 2 56242171 56243600 Vivi1g03430 1 73711271 73713000 PCT