Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03430 ATGGTCTCCAAGAAAATTGAAGAAAAAAAACTAGAAGCTCCCATCCATGGAGACATCTTAGAAGCCATACTCTCTCACGTGCCGCTCATTTACTTGCTTCCAGCCAGTCACGTGTCAAATTATTGGAACACCGCCGTCTCGAGCTCCCTCCGCCACATCAACCCTGTGAAGCCGTGGCTCACGTTTCACACTCAAAACCGCCGTGCTCCTCACATGATCAAATCATACGCGTACGATCCACGCTCGTTCACATGGATCAGAATCCACGCGCCAAAAACCAATCACACCTCGGTTATACGATCATCGCATTCCACGCTCCTCTACACGCTCTCTCCTAAGGAATTCACTTTCTCTAAAGATCCACTCCATCTCGACTGGAACCAGGCGGAAGCACCACGCGTTTGGCGCGTTGATCCGGTGGTTGCTCGTGTTGGGAACTGCATCGTTGTTGCTGGTGGCGCGTGTGACTTCGAGGATGATCCTTTAGCAGTTGAAATGTATAATATAGATTCTCGCGATTGGATCCGGTGTGAGTCCATGCCTGAGATGATGAAGGACACCACATCATCGACATGGCTCTCTGTTGCAGTCGCCGGTGAGGTTATGTATGTAACGGAGAAAAACTCCGGCACGATGTATTCTTTCGATTGCAAAACGATGACGTGGCAAGGACCGTACGATCTTCGAAGAGAGGAGAACATGTTCTTCAGCGTTACTGGAACGGTGCAGGATCGTTTGGTTGTTGTGGGAATATCAGGTGATGCGGAGAATGTGAAGGGAGTGAAAATATGGGAAGTGAAAGAGGAATTAGGGTTTGAAATGGTGGAGTTGTGTGCGATGCCGAAAGAGATGGTGGAGAAACTAAGAGGTGAGAGTGGGAGTGAGTTGTTGAATTCGATTGAATTGGTTTGTATTGGTGATTTTGTTTATGTTTATAATCGGTCGGAGCCCGAGGAGATGGTGGCGTGTGAGGTGTTGAAGGGAGGAGGATGTGAGTGGCGGAGTGTGAGGAATAGGGTGGTGAACGACGGTGTAAGGATGGGGAGAGTGGTGTTGTGTGGCGGTGATGTGGGATTGGAAGATTTGAAGAGCGCGGTTTCGGGGAAGTGTAGATTTGAATTGGATCAAGTGTAA 1134 0.4894 MVSKKIEEKKLEAPIHGDILEAILSHVPLIYLLPASHVSNYWNTAVSSSLRHINPVKPWLTFHTQNRRAPHMIKSYAYDPRSFTWIRIHAPKTNHTSVIRSSHSTLLYTLSPKEFTFSKDPLHLDWNQAEAPRVWRVDPVVARVGNCIVVAGGACDFEDDPLAVEMYNIDSRDWIRCESMPEMMKDTTSSTWLSVAVAGEVMYVTEKNSGTMYSFDCKTMTWQGPYDLRREENMFFSVTGTVQDRLVVVGISGDAENVKGVKIWEVKEELGFEMVELCAMPKEMVEKLRGESGSELLNSIELVCIGDFVYVYNRSEPEEMVACEVLKGGGCEWRSVRNRVVNDGVRMGRVVLCGGDVGLEDLKSAVSGKCRFELDQV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03430 377 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 278 - -
Vivi1g03430 377 SUPERFAMILY Kelch motif 72 265 IPR015915 GO:0005515
Vivi1g03430 377 Gene3D - 62 316 IPR015915 GO:0005515
Vivi1g03430 377 SUPERFAMILY F-box domain 18 50 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03430 Vivi-Chr1 73711271 73713000 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03430 - - gmx:100799807 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03430 1 73711271 73713000 Vivi1g03430 1 73711271 73713000 ECH
Vivi2g01309 2 56242171 56243600 Vivi1g03430 1 73711271 73713000 PCT