Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05180 ATGGCGGCCGGTCCTACTTTACCAACCGATCGACCTTCCGTCGCTCCAACCACCGTTCCTCTTCAACCACCACCGCCAATGCTCGTCTCTGATTCATTTGCCAAAGACGCTATCCTCGCTTGGTTTCACGGCGAGTTTGCTGCTGCCAACGCGATTATCGATGCTCTCTGTTCTCATCTCTCTCACCTTTCGTCTGGCTCTGATTACAGCTCTGTTTTCGCTGCTATTCACCGTCGGAGACTCCATTGGATCCAAATCCTTCAGATGCAGAAGTATCACTCCATTGCGGATGTTGCTCTTCAGCTGAAGATTGTTGCTGAGAAGAAAGCTTCCGTTGAGGTTGTTAATGAAAACGACGTCGTTGCGGCGGAGGAAGAGGAGGAGGAACCGAAAACAGAGGAGAAAGTGATCGACGGTGGTAATGGTAATGGTAATGAACATGAAGAGTATGATTCTCCTGAGAGTGAGATTACTGATTCAGGATCTCTAGAAAATCAAACTAGTTCGATGAATAGTGATATATGTTCCAATCATGAAGAGTGTGAAGGACGCCCTTCCCAGTTTAAGTTGACAAAAGGTTTCTCAGCAAAGGAGTCAGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTGAAGTTATATGAAGATGTTTTCACTGATTCAGAATTGTGCAAGCTGACAGATTTTGTGGATGAGATACATACTGCTGGTCAGAACGGAGAACTGTCTGGTGAAACTTTTATACTATTCAACAAACAGATAAAGGGTAACAAAAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAAGACACAAAAAGTAATATAGAGCCAATTCCAGCACTTCTGCAACATGTCATTGATCACTTTATTCAATGGCACTTACTTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTATTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTGACCACTCTTCTTCTCTCTGAATCAACCATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGACGGGAACTACAAGGGACCACTCATGCTCTCATTGAAGAAGGGGTCGCTTGTAGTGATGAGAGGAAACAGTGCTGACATGGCCAGGCATGTAATGTGTCCATCTCCTGACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGGCCAGATTCCAACCAATGCCAATCACCAACTCCTACAATGACAAGCGCAGTGACTCTGTGGCAGCCTGCCATTGCTAACCCATATGCTTTGCCAAATGGAGCTCTAAGTTGCGGCTATGAGGGTATGGACATGATGATGCCTAAATGGGGAATGCTTCCCAGCCCAATGATGATGCTGACCCCTATGCGTCCTATGGCATTGAATCCCCGCAAACTTGCTGGTGGTGGTACTGGAGTCTTCTTGCCCTGGAATGTTCCGTCCAGAAAACCTGCAAAGCATCTTCCACCACGTGCACAAAAGGGGAGGCTTCTAGCATTGCCTTCTCCTGTTGAACCACACATTGGAGAGTCCACTTCTGAACCTAGCATTTGTGTTGAAGGATGA 1587 0.4594 MAAGPTLPTDRPSVAPTTVPLQPPPPMLVSDSFAKDAILAWFHGEFAAANAIIDALCSHLSHLSSGSDYSSVFAAIHRRRLHWIQILQMQKYHSIADVALQLKIVAEKKASVEVVNENDVVAAEEEEEEPKTEEKVIDGGNGNGNEHEEYDSPESEITDSGSLENQTSSMNSDICSNHEECEGRPSQFKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLTDFVDEIHTAGQNGELSGETFILFNKQIKGNKRELIQLGVPIFGQIKEDTKSNIEPIPALLQHVIDHFIQWHLLPEYKRPNGCIINFFEEGEYSQPFLKPPHLDQPVTTLLLSESTMAFGRILMSENDGNYKGPLMLSLKKGSLVVMRGNSADMARHVMCPSPDRRVSITFFRVRPDSNQCQSPTPTMTSAVTLWQPAIANPYALPNGALSCGYEGMDMMMPKWGMLPSPMMMLTPMRPMALNPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLALPSPVEPHIGESTSEPSICVEG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05180 528 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 34 506 IPR044842 GO:0003729|GO:0006402|GO:0032451
Vivi1g05180 528 MobiDBLite consensus disorder prediction 156 176 - -
Vivi1g05180 528 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 305 402 IPR005123 -
Vivi1g05180 528 MobiDBLite consensus disorder prediction 133 151 - -
Vivi1g05180 528 Gene3D - 194 409 IPR037151 -
Vivi1g05180 528 MobiDBLite consensus disorder prediction 509 528 - -
Vivi1g05180 528 MobiDBLite consensus disorder prediction 121 178 - -
Vivi1g05180 528 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1g05180 528 SUPERFAMILY Clavaminate synthase-like 201 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05180 Vivi-Chr1 112552998 112557753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05180 K10767 - gmx:100791586 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05180 1 112552998 112557753 Vivi1g05180 1 112552998 112557753 ECH
Vivi6g04028 6 137646905 137651734 Vivi1g05180 1 112552998 112557753 PCT