Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03926 ATGGCACCTTCTATTTCCCTCTCTATCTTATTTCTTCTTTTTCTCCACTTTTCCCTCCAAACCATCTCAGCCAACTCTGAAGGGAATGCTCTTCATACTTTGAGGAGCAGACTTTCTGATCCCAACAATGTTCTGCAGAGTTGGGACCCAACACTGGTTAATCCATGTACTTGGTTTCATGTTACATGTGACGGCAACAACCGTGTCACTCGTTTAGACTTGGGAAATGCTAGTATTTCAGGAACTCTGGGCTCAGAGCTTGGTCATCTACACCATCTGCAGTATTTGGAATTGTATGGGAATGAGTTAAGGGGAAAGATTCCTAAGGAACTTGGAAAATTGAAAGCACTAATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAAATTCCAAAGTCATTTGGCAAGTTGAAGTCATTACGATTCTTGCGTCTAAACAACAACAAGCTGACAGGATCTATCCCAAGAGAACTCACTCGTCTCAAGAATCTCAAAATCTTTGATGTTTCAAATAATGATCTTTGTGGAACAATACCAGTAGATGGAAACTTTGGATCCTTTCCAATAAAAAGTTTTGAAAATAACAGACTTGGTGGTCCTGAATTGAAAGGACTTGTTCCGTACGATTTTGGATGCTAA 642 0.3988 MAPSISLSILFLLFLHFSLQTISANSEGNALHTLRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDGNNRVTRLDLGNASISGTLGSELGHLHHLQYLELYGNELRGKIPKELGKLKALISMDLYDNKLEGKIPKSFGKLKSLRFLRLNNNKLTGSIPRELTRLKNLKIFDVSNNDLCGTIPVDGNFGSFPIKSFENNRLGGPELKGLVPYDFGC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03926 213 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Vivi1g03926 213 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 191 - -
Vivi1g03926 213 FunFam Somatic embryogenesis receptor kinase 1 23 208 - -
Vivi1g03926 213 SUPERFAMILY L domain-like 26 201 - -
Vivi1g03926 213 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vivi1g03926 213 Pfam Leucine rich repeat 120 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03926 Vivi-Chr1 82821491 82823292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03926 1 201 Receptor kinase-like Gene Family AT1G71830 59.314 9.67e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03926 - - gmx:100816279 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03926 1 82821491 82823292 Vivi1g03926 1 82821491 82823292 ECH
Vivi2g04279 2 156519253 156520947 Vivi1g03926 1 82821491 82823292 PCT