Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01599 ATGAAATTCGGTAAGAGCCTCAGCAGCCAGATCGAGAAAACTCTACCGGAATGGCGCGACAAGTTTCTTTCATACAAAGAACTCAAGAAGAAGCTTAAGAACTTGGAACCAGCCGCCGCCGGAGAGGACCGTCCCGCGAAACGACTTAGGGTTGATTCCGGCGGTGGTACTTCCGCCGCTGATGCCGGAGAAATTCCGAAGGAGGAGAGTGACTTTAGAAACTTGTTGGAGAATGAACTCGAGAAATTTAACAACTTCTTCGTTGAGAAGGAGGAAGAGTACATTATTAGGCTCAAGGAGTTGAGAGATAGAGTGGCCAAAGTAAAGGATTATAGTGAAGAGATGATGAAAATTCGGAAAGAAATTGTGGATTTCCATGGAGAAATGGTTTTGCTGGAGAATTACAGTGCCCTGAATTACACAGGACTAGTGAAAATACTGAAAAAATACGACAAGAGAACCGGTGCACTCATTCGTTTGCCCTTCATTCAGAATGTTTTGCAACAACCTTTTTTCACCACCGACATGATATACAAGCTTGTAAAAGAGTGTGAAACAATGCTGGACTACCTTTTTCCTGTCAATGTTCCTCCCGCCGTTGGTGAGATAATCCCCGAAGCTGAAGGATGCGATCCTTCAACTTCAACCACTACCGAGAGTGATGGTTTGCTGATACCTAAGGAGTTAGAGGAGATTGAGTACATGGAGAGCCTTTATATGAAGAGTACCATATCAGCTTTGCATGTTTTGAAGGAAATTAGAAGCGGAAGCTCGACGGTAAGCATGTTTTCGTTGCCACCGTTACAATTGAATGGATTGGAAGAAACATGGAAGAAAGCCACAGTTCTTGAACAAGCAGCCAAGTAA 867 0.4383 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKNLEPAAAGEDRPAKRLRVDSGGGTSAADAGEIPKEESDFRNLLENELEKFNNFFVEKEEEYIIRLKELRDRVAKVKDYSEEMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQNVLQQPFFTTDMIYKLVKECETMLDYLFPVNVPPAVGEIIPEAEGCDPSTSTTTESDGLLIPKELEEIEYMESLYMKSTISALHVLKEIRSGSSTVSMFSLPPLQLNGLEETWKKATVLEQAAK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01599 288 Coils Coil 73 93 - -
Vivi1g01599 288 CDD SPX_AtSPX1_like 2 153 - -
Vivi1g01599 288 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 275 IPR031142 GO:0016036
Vivi1g01599 288 MobiDBLite consensus disorder prediction 36 64 - -
Vivi1g01599 288 Pfam SPX domain 1 39 IPR004331 -
Vivi1g01599 288 Pfam SPX domain 114 166 IPR004331 -
Vivi1g01599 288 MobiDBLite consensus disorder prediction 36 50 - -
Vivi1g01599 288 ProSiteProfiles SPX domain profile. 1 164 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01599 Vivi-Chr1 33836301 33838648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01599 - - gmx:100787780 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01599 1 33836301 33838648 Vivi1g01599 1 33836301 33838648 ECH
Vivi1g01599 1 33836301 33838648 Vivi4g01488 4 57173931 57175125 PCT