Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00785 ATGGACCCAACCGATCAAAATACTCAAGAACAAGAACAACCATGTTCTCCTGCTCTTCGCAAGAGATTACTTGAACAGGAAGATGATACTGATGCATATAACCTCGGCGCTTTGCCTCAAGAAGTTTATGATACTGCCAAACGCATCAAAACGCACGATTTTTTAGCCGGTTTCGATCAACCAAAACGCGAAATCATCAATATCTCTAGTGATGAAGAAGCTCAACATGAAAGTGAAGACAGGGAAAGTGAAAGTGATGTTAGTAATCGCATTGCGGCGCGGACTCTGCCATTGTTTCCTACAAGTCTGCAAGAGGAGTATAGCAAGAATATCGCAAGAAGATATGCGGCACGCATTCATAATGCTTCAGAGAATAAAAACAATGATGCTGTGAACAATGTGGCAGATAAAATCGATGATAACAATGGTGTGAAAGATGAAGTTGATGATGATGATGATTCTCCAACTCCGTTCTCCGAAGCAATCAAGGCTATTCAAGAACGCGCCGAGAGAAACAAGAAAAGAGAGATTGTTGAAGAACCTCCTCTATGGATTCCAAAACGAAGCGGAAAGGATTTGGTTAGGAGAAGGTCCTATGTTCCATCGTTGCAAGAACTGTCTCTTAACATTCTTGCCAAGCATTCTGATGCAATTGCTTCGCTCGATTGTGTCTGCGATGAGCTCAGACATAGGCTTAGTAATCTGCTGTGTGATTCTAGAAAGATGAACTGTCACTTTCTTGAACTACTTCTTACTGATGTTCCTACTCAAATTCGGCTTAAAGACTGTTCCTGGTTGACAGAAGAAGAATTTACTAAGTATTTCGGAACTTTGGTCACTTCTGAAATCGAGGTGCTGCAACTTGACAAGTGTGGAAGATTTATGACTGAATATACATTACCTGCTACATTGGCAAAGTCACCAAACTCCTTGTGTAAATTAACCACTCTATCGCTTACTGGTGCATGTCGTCTTACGAATGAAGGATTGCGGTTACTGGTTTCGTCTGCAACGGAAATTAGATCCATAAACCTAAGCCAGTGTTCACTTCTCACTTATGCTAGTCTTGACATTTTGGCTGATTCATTAGGATCGGTTTTGAAAGAGTTGTATATTGATGATTGCATACTCATTGATGTTGCGCTGATTTTGCCCGCCTTGAAGCGATTTAAGCGATTAGAAGTTTTGTCACTAGCTGGTGTTCCAACTGTTTCTGATAAGTTTATCATGAGTTACTTCACCGCGTGCGGTCATAACATCAAGGAACTTGTTTTAAGGGACTGCGTAAATTTGACTGATGCATCGATGAGAGTCATTGCTAAACATTGTCCTGGTTTACGTGTGCTTGATATTATGAACTTGGGGAAACTGACAGATTTATCCATCGGATATCTTGCAAATAGTTGTCAAGGATTGCGTACATTGAAGCTCCATCGCAATCCATTCAGCGATGAAGCAATTTCGGTATTTTTGGAGTTAGCTGGCAAAACCTTGGAAGAGCTTTCACTTAATAGCATTAACAAGGTTGGCCTATTGACATCCTCAGCACTTACAAAGAATGGCCAAAATTTGCATACCTTGGATCTATCATGGTGTCGAAATCTGTCTGACAATGAGTTCGGTTTAATTGTTGATAGCTGCTTGTCGCTGAGGTCACTTAAAATATTCGGATGCTCGCAGTTAACAGAGATGTTTTTCAAAGGACACTCGAACTCAGGGGTTCGGATCATTGGATTGAAGTTGAGTCCTTTATTTCAGCAATTCGAGTCTTGCTGTAAACTTTGA 1785 0.4084 MDPTDQNTQEQEQPCSPALRKRLLEQEDDTDAYNLGALPQEVYDTAKRIKTHDFLAGFDQPKREIINISSDEEAQHESEDRESESDVSNRIAARTLPLFPTSLQEEYSKNIARRYAARIHNASENKNNDAVNNVADKIDDNNGVKDEVDDDDDSPTPFSEAIKAIQERAERNKKREIVEEPPLWIPKRSGKDLVRRRSYVPSLQELSLNILAKHSDAIASLDCVCDELRHRLSNLLCDSRKMNCHFLELLLTDVPTQIRLKDCSWLTEEEFTKYFGTLVTSEIEVLQLDKCGRFMTEYTLPATLAKSPNSLCKLTTLSLTGACRLTNEGLRLLVSSATEIRSINLSQCSLLTYASLDILADSLGSVLKELYIDDCILIDVALILPALKRFKRLEVLSLAGVPTVSDKFIMSYFTACGHNIKELVLRDCVNLTDASMRVIAKHCPGLRVLDIMNLGKLTDLSIGYLANSCQGLRTLKLHRNPFSDEAISVFLELAGKTLEELSLNSINKVGLLTSSALTKNGQNLHTLDLSWCRNLSDNEFGLIVDSCLSLRSLKIFGCSQLTEMFFKGHSNSGVRIIGLKLSPLFQQFESCCKL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00785 594 Gene3D Ribonuclease Inhibitor 286 410 IPR032675 -
Vivi1g00785 594 Gene3D Ribonuclease Inhibitor 411 494 IPR032675 -
Vivi1g00785 594 Gene3D Ribonuclease Inhibitor 495 593 IPR032675 -
Vivi1g00785 594 MobiDBLite consensus disorder prediction 60 89 - -
Vivi1g00785 594 SUPERFAMILY RNI-like 276 563 - -
Vivi1g00785 594 PANTHER UNCHARACTERIZED 223 569 - -
Vivi1g00785 594 MobiDBLite consensus disorder prediction 60 88 - -
Vivi1g00785 594 SMART LRR_CC_2 417 442 IPR006553 -
Vivi1g00785 594 SMART LRR_CC_2 521 546 IPR006553 -
Vivi1g00785 594 SMART LRR_CC_2 311 336 IPR006553 -
Vivi1g00785 594 SMART LRR_CC_2 443 468 IPR006553 -
Vivi1g00785 594 SMART LRR_CC_2 337 362 IPR006553 -
Vivi1g00785 594 SMART LRR_CC_2 547 580 IPR006553 -
Vivi1g00785 594 MobiDBLite consensus disorder prediction 134 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00785 Vivi-Chr1 16948890 16951216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00785 K15082 - gmx:100798274 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00785 1 16948890 16951216 Vivi1g00785 1 16948890 16951216 ECH
Vivi1g00785 1 16948890 16951216 Vivi4g02060 4 99550829 99556101 PCT