Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00761 ATGTTGCCGATCGTTGAAGGCGATGAAGAAGATCATAACAATTTGTTAAAAGATGTTGAAACTATAACAAAAGGCCTTTCTAGAAATTCAACATCATTATCATCATCATCAAAATCGATAGAGAATGATCCCAATTCGAAACTTGATAAACAAGATAACAATTCGAAAAAGGATAAGAAATCATCTAGATGGAGTTGGAAGCCATTGAGAGCAATTTCCTTTAGCAGGAATAAGAAATTCAATTGTTGTTTTTCTCTTCAAGTTCATGTGATTGAAGGATTACCTTTAAGTTTCAATGATTTGACTCTGTGTGTTCATTGGAAACGGCGCGATGAACATTCGGTTACTCCTCCTGCGAAAGTGATTCAAGGTGTTGCTAAGTTTCAGGATATTTTGAACTGTACTTGTTCAATTGTTGGGAGTAAAAGTGGATTTAATCATTCTGCTAAGTATGAAGCTAAGCATTTTTTGCTTTATGTTTCTGTGCTTGGTGCTCCGGAGATTGATTTGGGGAGTCAGCGGTTGGATATCACGAGGCTGCTTCCGCTATCGTTGGAGGATCTTGAAGAGGAGAAAAGCTCGGGGAAATGGAGTACGAGTTATAGATTGTCGGGTAAGGCGAAAGGTGCTGTGATGAATGTGAGTTTTGGGTATATGGTGGTTGGTGATGATAATAGTTTGGCTCCTAATGTGTTGACTTCGAGGCAAAATTGTTTGGCTTTGAGCGAAACGGATGTGAATCAGTGTCAGTATCCGGCTCGGGTTAAAGGTGAGGTGAAGGATCTTCACGAGGTATTGAAATCACCAAAATCAGCAATGGCCAGTTCAACAAATACATTACCTAAGAAATTCGACAATGAAGACGCATGTAGTCCCTTACACAAGAAAGACGAACTTGTTGTACTAAAAGAGAATCTCGAGCCAGTCAAATTTGATGTGATTCAAGAAAACTTGAAGACAGTTGAGTCTTTAAAAGAGAAATCTTATGAATGTGAATATGATGGATTTTCTGTTGTTGATCGGGGTGTTGAACTTTCATCAAATGAACATGTTCAAGTGGAGGAATCCGTTGTTGATAGTTCTAAGGAATGTTCTGTGGTACATGAATTTTCTAACAAAAAGGTAGAGTTATGCACGAAAGAACTTCTCATGCAAGAAATAGAATCAGCTTTAAATAGTGTCTCGGAGTTGGAGACAGCGGCAATGGAATCTCCTAAAGTTATCGAAGTCACGTCTGAAAGTGAATTCAGTCAGCCACTCAGCTTGGATGATGCCACCGAACAAGTTGCTACTGAATTTTTGAGTATGCTGGGCATAGACAATAGTCCGACAGGCTTCAGTACTGAAAGTGAGCCCGAATCTCCAAGAGAGCGTCTTTTAAAAGAGTTTGAGAAGGAAGTTGAATCTGAGGGCTTCTCTTTATTTGATGTGGACATAGGTTATGATGATGAAGACAGTTATGATGATGAAGACGAAGAAGGAGATTATGGCAGCTATGGTACTTCTTTTGAATCTGAGCGGGGGGAATTCTCCACAGGTTTTGAGCCACCATCCTTGTTGCATGATCGGCAGGAAGTGCTTGAATTTGACAATGTGAAGAGAAAATCAATGGGCCGCATACTTGAAGACTTGGAAACCGAAGCCTTAATGCGTGAATGGGGTTTCAATGAGGAAGCTTTTCAGCATTCTCCATCAAAAGGCTTTGCTGGTTTTGAAAGTCCAGTACATCTACCTGAAGAACCTCCTAGATTACCTCCTCTGGCAGAAGGGTTTGGTCCTTTCCTCCGGACAAAAGATGGGGGATTTCTAAGGTCTATGAATCCTTCACTTTTTATGAATTCTAAAAGTGGTGGAAACTTAATCATGCAGGTTTCCAACCCTGTTGTTATGCCTGCAGAAATGGGTTCAGGGATAATGGAAACTTTACAGTATATGGCATCTGTTGGAATTGAAAAGCTTTCTATGCAGGCAAATAAGTATATGCCTCTGGAAGACATCACAGGGAAGACAATGCAACAAATATCATGGGAAGCCATGCCAAGCTTAGAGGGAAAAAACAGGCAATGGAATTTGCAACCAGATTCGGTGACACAGAAAGGTTCTACCTGCGTGCAAAGGGACATGAAAGGATCACCATCTAGACTAAAGTCTGAGATGTTTATTTCAAGTTCAATTGACCACCAGGAAGGTTCGGGTTTTTTTTCATTGGAAGATCTTGCTCCTTTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTAAAAATACAACATGGGATGTTGGAAGACGATACGCCATCAAACATCATTGCACAACAATCCTTTAAAGGTCCTCCTGGTCTCCAACACAAGGGGGTTAACATCGGTGGTTCTCTTGGCCTGGATGGAGCTGCTGCTTTGCAGCTGTTGGATATTAAATACAGTATTGATGAAGTGGATGGGATAATGGGATTATCATTAACTCTTGATGAATGGATGAGACTGGATTCGGGTGAGATTGATGATATAGATGATATCAGTGAGCATACTCGTAAACTTCTTGCTGCCCATCGTGCCAACTCTTTCGATGTAGTTCGTGATAGTTCAAAGGGAAGGAAGAAACAGGCCAAAGTTCATAGCAGGAAATGTGGCTTGCTGGGAAACAATTTCACAGTAGCACTAGTGGTGCAACTTCGTGATCCTCTAAGAAATTATGAACCAGTTGGAACACCAATGCTTTCTCTTATAGAAGTCGAGAGAGTGTTAGTCCCACCTAAGCAAAAGATTTACTTGACAGTGTCCGAGGTAGGGAACAATAGTGATGAGGACGATGAGTGTGAAATAAAAGCAAAGGTAGACATGAAAGAAAACAAAGAGGAGAGAAGTACTAAAGAAAGTGGCATTGCTCAATTCAGGATTACAGAAGTCCATGTTGCAGGTCTTAGGATTGAGTCCCATAAAAAGAAGCTTTGGGGTACATCAAATCAGCAACAGTCTGGTTCCCGTTGGTTGATTGCTAATGGAATGAGCAAAAGCAAAAGCAATAAGGATCCATTGATAAAGTCTAAGGCTGCTTCAAAATTTGGTGCTCAGGTCACCACCACAAAAGTGCAACCTGGAGATACATTGTGGAGCATATCATCTCGTATATATGGTACTGGCACAAAATGGAAGGAACTGGGAGTACTAAATCCACATATAAGAAATCCCAATATCATTATACCAAATGAATCTATAAGAATAGGTTGA 3231 0.4048 MLPIVEGDEEDHNNLLKDVETITKGLSRNSTSLSSSSKSIENDPNSKLDKQDNNSKKDKKSSRWSWKPLRAISFSRNKKFNCCFSLQVHVIEGLPLSFNDLTLCVHWKRRDEHSVTPPAKVIQGVAKFQDILNCTCSIVGSKSGFNHSAKYEAKHFLLYVSVLGAPEIDLGSQRLDITRLLPLSLEDLEEEKSSGKWSTSYRLSGKAKGAVMNVSFGYMVVGDDNSLAPNVLTSRQNCLALSETDVNQCQYPARVKGEVKDLHEVLKSPKSAMASSTNTLPKKFDNEDACSPLHKKDELVVLKENLEPVKFDVIQENLKTVESLKEKSYECEYDGFSVVDRGVELSSNEHVQVEESVVDSSKECSVVHEFSNKKVELCTKELLMQEIESALNSVSELETAAMESPKVIEVTSESEFSQPLSLDDATEQVATEFLSMLGIDNSPTGFSTESEPESPRERLLKEFEKEVESEGFSLFDVDIGYDDEDSYDDEDEEGDYGSYGTSFESERGEFSTGFEPPSLLHDRQEVLEFDNVKRKSMGRILEDLETEALMREWGFNEEAFQHSPSKGFAGFESPVHLPEEPPRLPPLAEGFGPFLRTKDGGFLRSMNPSLFMNSKSGGNLIMQVSNPVVMPAEMGSGIMETLQYMASVGIEKLSMQANKYMPLEDITGKTMQQISWEAMPSLEGKNRQWNLQPDSVTQKGSTCVQRDMKGSPSRLKSEMFISSSIDHQEGSGFFSLEDLAPLAMDKIEALSMEGLKIQHGMLEDDTPSNIIAQQSFKGPPGLQHKGVNIGGSLGLDGAAALQLLDIKYSIDEVDGIMGLSLTLDEWMRLDSGEIDDIDDISEHTRKLLAAHRANSFDVVRDSSKGRKKQAKVHSRKCGLLGNNFTVALVVQLRDPLRNYEPVGTPMLSLIEVERVLVPPKQKIYLTVSEVGNNSDEDDECEIKAKVDMKENKEERSTKESGIAQFRITEVHVAGLRIESHKKKLWGTSNQQQSGSRWLIANGMSKSKSNKDPLIKSKAASKFGAQVTTTKVQPGDTLWSISSRIYGTGTKWKELGVLNPHIRNPNIIIPNESIRIG 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00761 1076 MobiDBLite consensus disorder prediction 27 42 - -
Vivi1g00761 1076 MobiDBLite consensus disorder prediction 27 62 - -
Vivi1g00761 1076 ProSiteProfiles C2 NT-type domain profile. 72 220 IPR019448 -
Vivi1g00761 1076 MobiDBLite consensus disorder prediction 480 497 - -
Vivi1g00761 1076 CDD LysM 1030 1075 IPR018392 -
Vivi1g00761 1076 Gene3D LysM domain 1019 1076 IPR036779 -
Vivi1g00761 1076 SUPERFAMILY LysM domain 1027 1075 IPR036779 -
Vivi1g00761 1076 MobiDBLite consensus disorder prediction 43 62 - -
Vivi1g00761 1076 MobiDBLite consensus disorder prediction 480 517 - -
Vivi1g00761 1076 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 8 1070 IPR039614 -
Vivi1g00761 1076 ProSiteProfiles LysM domain profile. 1027 1075 IPR018392 -
Vivi1g00761 1076 Pfam LysM domain 1030 1075 IPR018392 -
Vivi1g00761 1076 Coils Coil 380 400 - -
Vivi1g00761 1076 SMART LysM_2 1028 1076 IPR018392 -
Vivi1g00761 1076 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 77 223 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00761 Vivi-Chr1 16318030 16321801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00761 - - cam:101503777 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00761 1 16318030 16321801 Vivi1g00761 1 16318030 16321801 ECH
Vivi1g00761 1 16318030 16321801 Vivi4g02117 4 104744230 104749025 PCT