Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00694 ATGGAGAATTTAATTAGAAGAAAATTTTTTGTATTGTTATTATTTCTTTGGGTTTATTCAGTCAATGCCTCTGTGAGTTATGATAACAAAGCCATTCTTGTTAATGGACAGAGAAAAATTTTATTTTCTGGATCTATTCATTATCCAAGAAGTACACCTCAGATGTGGCCAGACCTTATTCAAAAGGCTAAAGATGGAGGGTTAGATGTTATACAGTCTTATGTGTTTTGGAATGGACATGAACCTTCTCCTGGCAAGTATTATTTTGAAGATAGGTATGATTTGGTTAAGTTCATCAAGCTGGTGCAACAAGCTGGTCTTTATTTTCATCTTCGTATTGGTCCCTACGCATGTGCAGAATGGAATTTAGGAGGATTTCCAGTTTGGCTTAAGTATGTTCCAGGAATTGAATTCAGAACAGATAATGAGCCATTCAAGGCAGCAATGCAAAAATTTACTACTAAGATTGTGAACATGATGAAGGCTGAGAAATTGTTTCAAACACAGGGAGGTCCAATCATTCTTTCTCAGATTGAAAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCTCCTGGAAAAGCTTACACCAAATGGTTTTCTCAAATGGCTCTTGGTTTAAATACCGGCGTCCCGTGGATTATGTGCAAGCAAGAAGATGCTCCTGATCCTATCATTGATACTTGCAATGGTTACTACTGTGAAAACTTCAAGCCAAACAATAACAATAAACCCAAAATGTGGACTGAGAATTGGAGTGCCTGGTACACCGAGTTTGGTGGCGGAGTTCCGCGTAGACCAGCAGAAGACATGGCATTTTCTGTTGTAAGATTTGTACAAAATGGTGGCTCATTTGTTAACTACTACATGTATCATGGAGGAACTAACTTTGATCGAACATCAGGCGGACCTTTCATTGCTACAAGCTATGACTTTGATGCTCCCATTGATGAATTTGGACTTTTGAACGAACCAAAATGGGGACATTTGAAATATTTGCACAAAGTAATTAAGCAGTGTGAACCCGTTTTAGTGTCAGCTGATTCCACAGTATATTGGCCTGGAAAAAATTTAGAGGTGCATGTTTTCAAACCAAAATCGGGTGATTGTGTTGCTTTTCTTGGAAATTATGACACCAAATCTTCTGCAACAATTAAATTTGGAAATGGACAATATGACTTACCACCTTGGTCTATTACCATTCTTCCTGATTGCAAAACTGCAATTTTCAACACTGCAAAAGTTGGTGTTCAATCTCCAATGAAGATGATTCCTCTGAAGAGTGCATTTAATTGGCAGTCATATAATGAAGAACCATCATATTCCGCTGTTAAGGATTCTTTCACAGCATATGCATTATGGGAGCAGGTTAACATTACACGAGATTATACGGATTATTTGTGGTATATGACCGATGTGAACATTGATCAGAATGAAGGTTTTATAAAGAAAGGACAAACTCCTCTTCTTACAATAAATTCAGCCGGACATGTTCTGCATGTTTTTATTAATGGTCAACTTTCAGGTACTGTGTATGGATCATTGGAGTTTCCTAAATTGACATTTAGTAAGAATGTTAAACTAAATGTTGGAAATAACAAGATATCTTTGCTTAGTATTACCGTAGGTCTCCCGAATGTCGGCGTGCACTTTGAAACATGGAATGCCGGGGTGTTAGGCCCGGTCACACTCGCGGGTCTAAACGAAGGAACTAGAGACCTGTCTCGACAGAAATGGTCATACAAGATTGGTCTCAAGGGTGAAGACTTAAAACTTCACACAGTTAGTGGAAGTAAATCAGTAAAATGGGTAGAAGGATCATCATTGGCTAAAAGACAACCTTTGACATGGTACAAGACAACTTTTAGCACACCAGAAGGAAATGATCCATTAGCTCTAGATATGAGTACTATGAGAAAGGGTCAAGTATGGATAAACGGTCGGAACATCGGACGTCATTGGCCCGGGTATAAAGCGCGCGAGGAATGTGGCGATTGTTATTATGCTGGAACTTATACAGAAAAAAAATGTCGGACGAATTGTGGACAACCCTCCCAAAAATGGTACCATGTTCCTAGATCATGGTTGAGCTCAAATGAGAACCATTTGGTTGTGTTTGAAGAATGGGGAGGTGACCCTACTGGAATATCTTTGGTGAAAAGAACAGCTTAA 2172 0.3881 MENLIRRKFFVLLLFLWVYSVNASVSYDNKAILVNGQRKILFSGSIHYPRSTPQMWPDLIQKAKDGGLDVIQSYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYFHLRIGPYACAEWNLGGFPVWLKYVPGIEFRTDNEPFKAAMQKFTTKIVNMMKAEKLFQTQGGPIILSQIENEYGPVEWEIGAPGKAYTKWFSQMALGLNTGVPWIMCKQEDAPDPIIDTCNGYYCENFKPNNNNKPKMWTENWSAWYTEFGGGVPRRPAEDMAFSVVRFVQNGGSFVNYYMYHGGTNFDRTSGGPFIATSYDFDAPIDEFGLLNEPKWGHLKYLHKVIKQCEPVLVSADSTVYWPGKNLEVHVFKPKSGDCVAFLGNYDTKSSATIKFGNGQYDLPPWSITILPDCKTAIFNTAKVGVQSPMKMIPLKSAFNWQSYNEEPSYSAVKDSFTAYALWEQVNITRDYTDYLWYMTDVNIDQNEGFIKKGQTPLLTINSAGHVLHVFINGQLSGTVYGSLEFPKLTFSKNVKLNVGNNKISLLSITVGLPNVGVHFETWNAGVLGPVTLAGLNEGTRDLSRQKWSYKIGLKGEDLKLHTVSGSKSVKWVEGSSLAKRQPLTWYKTTFSTPEGNDPLALDMSTMRKGQVWINGRNIGRHWPGYKAREECGDCYYAGTYTEKKCRTNCGQPSQKWYHVPRSWLSSNENHLVVFEEWGGDPTGISLVKRTA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00694 723 FunFam Beta-galactosidase 289 417 - -
Vivi1g00694 723 FunFam Beta-galactosidase 20 340 - -
Vivi1g00694 723 FunFam Beta-galactosidase 442 578 - -
Vivi1g00694 723 Pfam Beta-sandwich domain in beta galactosidase 344 415 IPR041392 -
Vivi1g00694 723 SUPERFAMILY (Trans)glycosidases 24 341 IPR017853 -
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 640 656 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 PRINTS Glycosyl hydrolase family 35 signature 613 627 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 SUPERFAMILY Galactose-binding domain-like 578 718 IPR008979 -
Vivi1g00694 723 PANTHER BETA-GALACTOSIDASE RELATED 17 722 IPR001944 GO:0004553|GO:0005975
Vivi1g00694 723 Pfam Glycosyl hydrolases family 35 32 335 IPR031330 -
Vivi1g00694 723 FunFam Beta-galactosidase 586 723 - -
Vivi1g00694 723 Gene3D - 436 577 - -
Vivi1g00694 723 Gene3D Glycosidases 19 341 - -
Vivi1g00694 723 SUPERFAMILY Galactose-binding domain-like 400 568 IPR008979 -
Vivi1g00694 723 Gene3D - 578 723 - -
Vivi1g00694 723 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00694 Vivi-Chr1 14936830 14941504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00694 1 723 Glycoside Hydrolase AT3G52840 68.132 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00694 - - gmx:106795462 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00694 1 14936830 14941504 Vivi1g00694 1 14936830 14941504 ECH
Vivi1g00694 1 14936830 14941504 Vivi4g02285 4 113286380 113291856 PCT