Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00611 ATGGCAGCAGAAGGGAAGAAGCAACCAATAATTGTTTTGACCAAGCCATTCTCATTGCAAATTGAATCCGATTCAGAGCCGAGTTACAGTTATAGAGCCCCAAATATTGTACGTCGCTTGTTAAGTTTGTTTAAGAATGTACGGCCCGGAGCAGATCTCACTAACTTACAGCTTCCACCTCTATTTTATTTCCCAAAATCACAACTTCAATGCTACGGTGAATCAGTATACAGCACGACTTCAAATTCAAACTTGCTGACCCAATGCAACAACGAGCAAAGTCCATTGGAAAGGCTCACATCCGTCGTAGCATGGAGCATATCTACCACGCGCCCTATGTCTTTTGGTGTTGCTCCATATAATCCCATTCTTGGAGAGACACACCATGTTTCCAAAGGCAACCTTAACGTTCTACTCGAACAAGTTTCCATCAATCCTCCCGTATCTGCTCTTCATGCAACAGACAAGAAGGAACACATTGAAATGATATGGTCACAGCAACCTGCTCCAAAGTTTCGCGGTACAAGTATCGAAGCTGAAGTGCTTGGAAAAAGGGTTCTAAAGCTTAGAAATCACGAGGAAACGTATGAAATGAACAGTCCTCGCCTCTCGATTAGAATTCTTCCGTTTCCAGGAGTTAGTTGGGTTGGCAATGTTAATATACTGTGCAAAGAGACAGGTCTTGTGGCTGAATTATCCTACAAATCATCCTATTCTTTTCTTGGACTTGGAGGGAATAGTAAGTTAGTCCAAGGGAAGATCCTTGATTCCTCATCACTCAATGTACTATATGAAATTGATGGTCAATGGGATAGGACTGTTAAAGTGAAGGATACAAACAGTGGGAAAGTCAAAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCAAAGCTCCTATTGTCAAAGACGCAGAGGGTGTGTTGCAAACTGAATCAGCTCTTATCTGGGGTGAGTTGACACAAGCCATTATAAGCAATGACTGGGAGAAAGCAAAAGAAGCCAAAAAAGGTGTGGAGGAAAGACAAAAGAAGATGTTGAGAGAAAGAGAAACCAAAGGAGAAAGTTGGACTCCTAAGAATTTTGTGGTGTCTTATAGTAATGAAAGTGGGTTGGAGTGTGATTGTTCACCCATTAACAAATGGGTCCCTCCTGCTCCTATCACAGCCCTTTAA 1176 0.4192 MAAEGKKQPIIVLTKPFSLQIESDSEPSYSYRAPNIVRRLLSLFKNVRPGADLTNLQLPPLFYFPKSQLQCYGESVYSTTSNSNLLTQCNNEQSPLERLTSVVAWSISTTRPMSFGVAPYNPILGETHHVSKGNLNVLLEQVSINPPVSALHATDKKEHIEMIWSQQPAPKFRGTSIEAEVLGKRVLKLRNHEETYEMNSPRLSIRILPFPGVSWVGNVNILCKETGLVAELSYKSSYSFLGLGGNSKLVQGKILDSSSLNVLYEIDGQWDRTVKVKDTNSGKVKVIYDAKEVISGLKAPIVKDAEGVLQTESALIWGELTQAIISNDWEKAKEAKKGVEERQKKMLRERETKGESWTPKNFVVSYSNESGLECDCSPINKWVPPAPITAL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00611 391 Gene3D - 124 301 - -
Vivi1g00611 391 SUPERFAMILY Oxysterol-binding protein-like 40 374 IPR037239 -
Vivi1g00611 391 FunFam Oxysterol-binding protein-related protein 4B 309 383 - -
Vivi1g00611 391 Gene3D - 309 381 - -
Vivi1g00611 391 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 40 362 IPR000648 GO:0008289
Vivi1g00611 391 FunFam Oxysterol-binding protein-related protein 4C 123 301 - -
Vivi1g00611 391 Pfam Oxysterol-binding protein 43 318 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00611 Vivi-Chr1 13395743 13398844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00611 K22285 - gmx:100813302 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00611 1 13395743 13398844 Vivi4g02401 4 117947422 117955058 PCT