Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03747 ATGACACATTCGAATCGATATTTGTGTATTGCGACAAGTGGAGGCTTGAATCAGCAAAGAACGGGGATTACAGATGCTGTTGTTGCTGCACGAATTTTGAATGCTACTCTTGTTGTTCCAAAATTGGATCAACGATCTTTCTGGAAAGATTCTAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTGTATCATATCTGTCCCAAGATGTCAAGATTATCAAGCAACTTCCCAGTAAGGGTAGGAAACCATTATCTGCATACAATATGCGGGTTCCAAGGAAGTGTAATGAAAGATGTTATATAAATCGCATATTACCTGTACTCGTGAAAAAACATGCTGTGCAGCTTAGCAAATTTGACTACAGGCTAGCAAACAGGTTGGATACAGAATATCAGAAGTTGAGATGTAGAGTTAATTACCATGCTTTAAAATTTACCAGCCCAATACTTGCAATGGGGCAAAAATTGGTCCATTGGATGAGGATGAGAAGTAAACATTATATTGCACTGCACTTAAGATTTGAACCTGATATGCTGGCATTTTCTGGATGTGATTATGGTGGAGGGGAGAGGGAGCAGAAAGAACTAGGCGCAATAAGGCGGAGGTGGAAGACATTACATAGAAGCAATCCTGATAGGGCAAGGAGGCAGGGAAGATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGCTAAGAGCATTGGGATATGGTTCTGATGTTCATATTTACGTTGCATCAGGGGAAGTATATGGAGGGGAAAGAACGCTGGCGCCTCTCAAGGAATTATTTCCTAATTACCATTCAAAAGAGACCATTGCTACCAAGGAAGAATTACAATCATTTTCTTCATTTTCTTCTCGCATGGCTGCACTTGACTTCATTGTCTGTGATGAAAGTGATGTATTTGTAACCAATAATAATGGAAATATGGCAAAAATGTTAGCTGGACGAAGGAGATACTTTGGGCATAAACCAACCATTCGTCCAAATGCTAAAAAACTCTACCGATTGTTCTTGAATAGAACAAACATGACTTGGGATGTTTTTGCTTCCAGTGTCCGTAATTTCCAGAGAGGCTTCATGGGGGAGCCAAAGGAAGTAAGACCAGGTAGAGGCGGATTTCATGAGAATCCATCGACCTGCATATGTGAAGATTCCACAGCCAAAGTTGAGAAAAATTCAGGACCTCGAAAACATGGAAAGGATAATACAACTAAGAGAAATGCCTCAAATGATGAACCGGATGTTGACAATGAGCCTGAATGGGTAGAAATGGATGATGATGATGAGGACCAGAATGATCTAGCAGATAAGGGTACATTCAATGAAACATTTGCGGACTATGATGCTATGAACTTCGAGGATCCTGATTTGGAGGAAATTATATCAGATTAG 1398 0.4027 MTHSNRYLCIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQRSFWKDSSNFSEIFDVDWFVSYLSQDVKIIKQLPSKGRKPLSAYNMRVPRKCNERCYINRILPVLVKKHAVQLSKFDYRLANRLDTEYQKLRCRVNYHALKFTSPILAMGQKLVHWMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEREQKELGAIRRRWKTLHRSNPDRARRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGERTLAPLKELFPNYHSKETIATKEELQSFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKMLAGRRRYFGHKPTIRPNAKKLYRLFLNRTNMTWDVFASSVRNFQRGFMGEPKEVRPGRGGFHENPSTCICEDSTAKVEKNSGPRKHGKDNTTKRNASNDEPDVDNEPEWVEMDDDDEDQNDLADKGTFNETFADYDAMNFEDPDLEEIISD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03747 465 MobiDBLite consensus disorder prediction 451 465 - -
Viun9g03747 465 Pfam GDP-fucose protein O-fucosyltransferase 7 321 IPR019378 -
Viun9g03747 465 MobiDBLite consensus disorder prediction 391 415 - -
Viun9g03747 465 PANTHER O-FUCOSYLTRANSFERASE 16 2 431 - -
Viun9g03747 465 MobiDBLite consensus disorder prediction 416 435 - -
Viun9g03747 465 PIRSF UCP009360 1 392 IPR024709 -
Viun9g03747 465 CDD O-FucT_plant 7 327 IPR024709 -
Viun9g03747 465 MobiDBLite consensus disorder prediction 386 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03747 Viun-Chr9 42472177 42478169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03747 4 338 Miscellaneous Gene Families AT1G22460 49.267 3.90e-98 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03747 - - gmx:100817698 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03747 9 42472177 42478169 Viun9g01799 9 27512761 27518427 ECH
Viun9g03747 9 42472177 42478169 Viun9g03747 9 42472177 42478169 ECH