Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01799 ATGGTAAGCAGAGGCTCGTATGGCTCTGGCGGCCTCTTGACGGGTAGATTCCATGCCAGAAAGCTATCCCCAAGCGTCATCACTTTCTATACCATCTTCATATTTGCTTTCTCCATTATCGTCTTCTTGTTCTACGTGAGGAACATTAGTCTTGATCAAGATCCACGACGCCCTTTCATTTCTCGACAATCTAATTCTCATCAGGTGCCAGAGTTACATGTGCACGATAAGAAGCAACTTTGGGATTCTCCGTTTAATCATGGCTTACACCAGTGTGTTGAGCGGACTACTAAATATAAAGCTGCCAAAGGATTTGATCGCTATCTAACTGTGAAAAGTAACGGGGGACTAAATCAAATGCGAACCGGTATATCAGACATGGTGGCTGTGGCACATATGATGAATGCAACTTTAGTTGTTCCTCAATTGGATAAACGTTCATTCTGGAAAGACTCAAGTGTATTTTCAGATATATTTGACGAGCTTCATTTCATTCAATCCCTGAAAGATGATATCAGGATTGTTAGTGAGCTTCCCAAAAGCTTGGAAGGTATCCCCCGGGCCAGGAAACACTTTACTTCCTGGGCTGGGTTCGGTTACTATACAGATATGACAAGGTTGTGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTTGACATACAGAGGTTGAGATGCCGTGCAATGTATCAGGCGCTTCGATTTTCTCCTCCAATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACAAGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGCTGTCTTTTACCGGTTGCTCTTATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTACTGGAAAGTAAAAGAGATAAATTCTACAGAACAGAGAATTGGAGGATTTTGTCCACTTACTCCAAAGGAGGTGGGCATTTTTCTTCACGCTCTTGGATACCCACCATCCACACCAATATACATAGCAGCTGGAGAGATCTATGGTGGTAACACTCATCTTTCGGAGCTCTCATCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTCACTAATCATGCTTCCCAAACTGCTGCACTTGATTACATAATATGTGTAGAGAGTGATGTATTTGTTCCGTCATATTCGGGAAATATGGCAAGAGCAGTGGAGGGACACCGTAGATTCTTAGGTCACCGCAAGACAATCAATCCAGACAGGAAAGTTCTGGTTGGAATTTTTGATATGGTGGAAACTGGAGTGCTTGAAGAAGGAACGGAACTGTCGCAAATGGTTCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCATGGTTCTCCACCAGGAGTCAAAGGCCGTGCACGATTTAAGACTGAAGAGTCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTAGAAATAACATGA 1536 0.4264 MVSRGSYGSGGLLTGRFHARKLSPSVITFYTIFIFAFSIIVFLFYVRNISLDQDPRRPFISRQSNSHQVPELHVHDKKQLWDSPFNHGLHQCVERTTKYKAAKGFDRYLTVKSNGGLNQMRTGISDMVAVAHMMNATLVVPQLDKRSFWKDSSVFSDIFDELHFIQSLKDDIRIVSELPKSLEGIPRARKHFTSWAGFGYYTDMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALRFSPPIENLGKRLVDRLRSQGGRYIALHLRYEKDMLSFTGCSYGLTDAESEELRILRENTNYWKVKEINSTEQRIGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATPEELKDFTNHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKVLVGIFDMVETGVLEEGTELSQMVQRMHKNRQGAPRKRHGSPPGVKGRARFKTEESFYENPYPECICGSKSKLEIT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01799 511 MobiDBLite consensus disorder prediction 465 480 - -
Viun9g01799 511 MobiDBLite consensus disorder prediction 464 487 - -
Viun9g01799 511 PIRSF UCP009360 12 506 IPR024709 -
Viun9g01799 511 Gene3D - 242 432 - -
Viun9g01799 511 PANTHER OS02G0726500 PROTEIN-RELATED 30 503 - -
Viun9g01799 511 Pfam GDP-fucose protein O-fucosyltransferase 108 423 IPR019378 -
Viun9g01799 511 CDD O-FucT_plant 108 429 IPR024709 -
Viun9g01799 511 FunFam O-fucosyltransferase 28 238 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01799 Viun-Chr9 27512761 27518427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01799 74 502 Miscellaneous Gene Families AT1G22460 57.907 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01799 - - gmx:100810961 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03747 9 42472177 42478169 Viun9g01799 9 27512761 27518427 ECH
Viun9g01799 9 27512761 27518427 Viun9g01799 9 27512761 27518427 ECH