Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03330 ATGGAAAACTTACCGAAGATCAATGAAGGAAACCACTCCGAGGATGATGAAAACATCATAATAAATCCCCATTTTGATGATGGCCTGAATAATTGGTCTGGAAGAGGCTGCAAGATTGCCGTACATGACTCCGTGGGAGATGGAAAGATTCTTCCCAAGTCTGGTAAATTCTTTGCATCTGCAACAGAACGTACCCAAAGCTGGAACGGGATTCAGCAGGAGATCACAGGAAGAGTGCAGCGCAAGCTTGCCTATGAGGTTACTGCATTAGTTCGGATATTTGGTAACAATGTCACCACTTCTGATGTAAGGACTACTTTGTGGGTTCAAGCACCAGATCTTCGGGAGCAGTATATAGGCATTGCCAATGTGCAGGCAACAGATAAAGATTGGGTCCAAATGCAGGGAAAGTTCCTTCTAAATGGTTCTCCAGCAAAAGTAGTGGTTTATTTAGAAGGTCCCCCTCCAGGCACTGACATTCTTGTCAATACTTTGGTTATAAAACATGCACCTAAAACACCACCATCAACACCACCAGAGTGTGAGATTGCTGCTTTTGGTGTTAACATAATTGAAAACAGTAATCTGGGTGATGGCACTAATGGATGGTTTCCACTTGGGAGTTGTACTCTGAGCGTTGGGAGTGGTTCACCGCGTATAATTCCATCAATGGCAAGAGACTCTCTTGGGCCTCATGAATCCTTGAGCGGGCGCTACCTCCTTGTGACCAATCGCACACAAACATGGATGGGTCCTGCTCAGATGATAACTGAGAAATTGAAACTCTTTCTAACTTATCAAGTATCTGCTTGGGTCAGGGTCGGTTCCAGTTCAACCGGGCCTCAGAATGTTAATGTTGCGCTTAGCGTTGATAACCAGTGGGTCAATGGAGGGCAAGTTGAGATTGCTGATGGCAGGTGGCACGAGATTGGTGGGTCTTTTAGAATCGAGAAGCAGGCATCTAAGGTTATGGTTTATATTCAAGGACCTGCTTCTGGTGTTGATTTAATGATTGCTGGACTTCAAATTTTTGGTGTTGATAGACAAGCAAGGTTTAAGTATTTGAGGAGGCAGACAGAAAAGATCCGTAAGCGTGATATTACTCTAAAATTCTCTGGGCTGGATTCAATTGGAAATCTTGGAACCTTGGTGAGAGTCAGACAAATACAAAATGATTTTCCCATAGGAACGTGCATTAACAGAAGCAATATTGACAACGAAGATTTTGTGGACTTCTTTGTGAAACATTTTAACTGGGCAGTGTTTGGCAATGAGTTGAAGTGGTACTGGACTGAGCCACAACAAGGGAAGCTGAATTACAAGGATGCTGATGAAATGCTCGACTTATGTCAGAAAAACAAGATAGACACTCGAGGCCATTGTATCTTCTGGGAAGTAGACAGCAATGTTCAGCAATGGATCAAATCACTGAATAAAACTGATTTGATGAAAGCTGTCCAAAATCGCATGAATGATTTATTGACTCGCTACAAGGGTAAGTTCAGACACTATGATGTGAACAACGAAATGTTGCACGGTTCGTTCTATCAGGACAAACTAGGTAAGGATATAAGGGCAAACATGTTCAAGACAGCACACCAATTAGATCCATCTGCTACTCTTTTGAATGACTATCATGTTGAAGATGGATGTGACACCAGATCATCCCCAGAAAAGTACATTCAACATATTCTTGATTTGCAGCAGCAGGGTGCCCCAGTTGGGGGAATAGGAATTCAAGGTCACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCCCTTGATAAATTGGGCACTCTTGGTATACCAATCTGGTTTACTGAGCTTGATGTTTCTTCCATCAATGAATATGTCAGAGCTGATGATCTAGAAGTTATGCTGCGGGAAGCTATGGCACACCCTGCCATAGACGGTGTAATGCTATGGGGATTTTGGGAGTTGTTTATGAGTCGGGAAAATTCACACCTGGTGAATGCAGAAGGAGAACTCAACGAAGCTGGGAAAAGATTCCTTGCTCTCAAACAAGAGTGGTTGTCTCACAGCCATGGTTATGCTGATGCGCAAGGGGAATTCAGCTTCAGAGGCTTCAGTGGAACATACATCGTCGAAGTTGTCACCTTAGCAAAGAAAGTTTCTAAGACATTCGTTGTTGACAAGGGTGACTCCTCAACGGTGGTATCAATAGATTTAGATGATGAAAACATCATAATAAATCCCCATTTTGATGATGGCCTGAATAATTGGTCTGGAAGAGGCTGCAAGATTGCCGTACATGACTCCGTGGGAGATGGAAAGATTCTTCCCAAGTCTGGTAAATTCTTTGCATCTGCAACAGAACGTACCCAAAGCTGGAACGGGATTCAGCAGGAGATCACAGGAAGAGTGCAGCGCAAGCTTGCCTATGAGGTTACTGCATTAGTTCGGATATTTGGTAACAATGTCACCACTTCTGATGTAAGGACTACTTTGTGGGTTCAAGAACAAGATCTTCGGGAGCAGTATATAGGCATTGCCAATGTGCAGGCAACAGATAAAGATTGGGTCCAAATGCAGGGAAAATTCCTCCTAAATGGTTCTCCATCAAAAGTAGTAGTTTATTTAGAAGGTCCCTCTCCAGGAACTGACATCCTTGTCAATAATTTGGTTGTAAAACATGCAGCTAAAACACCACCATCAACACCACCAGATTGTGAGATTGCTGCTTTTGGTGTTAACATAATTGAAAACAGTAATCTGGATGATGGCACTAATGGATGGTTTCCACTTGGGAGTTGTACTCTGAGCGTTGGGAGTGGTTCACCGCGTATAATTCCATCAATGGCAAGAGAATCTCTTGGGCCTCATGAATCTTTGAGCGGGCACTACATCCATGTAACCAATCGCACACAAATATGGATGGGTCCTACTCAGATCATCACTGAGAAATTGAAACTCTTTCTAACTTATCAAGTATCTGCTTGGGTGAGGATCGGTTCTGGATCAAATGGGCCTCAGAATGTTAATGTTGCGCTTAACGTTGATAACCAGTGGGTCAATGTAGGACAAGTTGAGATTGCTGATGGCAGGTGGCACGAAATTGGTGGGTCTTTTAGAATCGAAAAGCAGGCATCTAAGGTTATGGTTTCTATTCAAGGACCTGCTTCTGGTGTTGATTTAATGATTGCTGGACTTCAAATTTTTGCTGTTGATAGACAAGCAAGGTTTAAGTATTTGAGGAGGCAAACAGAAAAGATCCGTAAGCGTGATATTACTCTAAAATTCTCTGGGCTGGATTCAATTGGAAATCTTGGAACCTTGGTGAGAGTCAGACAAATACAAAATGATTTTCCCATAGGAACGTGCATTAGCAGAAGCAATATTGACAATGAAGATTTTGTGGACTTCTTTGTGAAACATTTTAACTGGGCAGTTTTTGGCAATGAGTTGAAGTGGTTCTGGACTGAGCCACAACAGGGGAAGCTGAATTACAAGGATGCTGATGAAATGCTTGACTTATGTCAGAAAAACAAGATAGACACTCGAGGCCATTGTATCTTCTGGGAAGTAGACAGCACTGTTCAGCAATGGATCAAATCACTGAATAAAACTGATTTGATGAAAGCTGTCCAAAATCGCATGAATGACTTATTGACTCGCTACAACGGTAAGTTCAGACACTATGATGTGAACAACGAAATGTTGCACGGTTCGTTCTATCAGGACAAACTAGGTAAGGATATAAGGGCAAACATGTTCAAGACAGCACACCAATTAGATCCATCTGCTACTCTTTTTGTGAATGACTATCATGTTGAAGATGGATGTGACACCAGATCATCCCCAGAAAAGTACATTCAACATATTCTTGATTTGCAGCAGCAAGGTGCCCCAGTTGGGGGAATAGGAATTCAAGGTCACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCCCTTGATAAATTGGGCACTCTTGGTATACCAATCTGGTTTACTGAGCTTGATGTGTCTTCCATCAATGAATATGTCAGAGCTGATGATCTAGAAGTTATGCTGCGGGAAGCTATGGCACACGCTGCCATAGACGGTGTAATGCTATGGGGATTTTGGGAGTTGTTTATGAGCCGGGAAAATTCACACCTGGTGAGTGCAGAAGGAGAACTCAACGAAGCTGGAAAAAGATTCCTTACTCTCAAACAAGAGTGGTTGTCTCACAGCCATGGTTATGCTGATGCGCAAGGGGAATTCAGCTTCAGAGGCTTCAGTGGAACATACAACGTCGAAGTGGTCACCTTAGCAAAGAAAGTTTCTAAGACATTCGTTGTTGATAAGGGTGACTCCTCAATAGTGGTATCAATCGATTTATAA 4350 0.4271 MENLPKINEGNHSEDDENIIINPHFDDGLNNWSGRGCKIAVHDSVGDGKILPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVTTSDVRTTLWVQAPDLREQYIGIANVQATDKDWVQMQGKFLLNGSPAKVVVYLEGPPPGTDILVNTLVIKHAPKTPPSTPPECEIAAFGVNIIENSNLGDGTNGWFPLGSCTLSVGSGSPRIIPSMARDSLGPHESLSGRYLLVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRVGSSSTGPQNVNVALSVDNQWVNGGQVEIADGRWHEIGGSFRIEKQASKVMVYIQGPASGVDLMIAGLQIFGVDRQARFKYLRRQTEKIRKRDITLKFSGLDSIGNLGTLVRVRQIQNDFPIGTCINRSNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGKLNYKDADEMLDLCQKNKIDTRGHCIFWEVDSNVQQWIKSLNKTDLMKAVQNRMNDLLTRYKGKFRHYDVNNEMLHGSFYQDKLGKDIRANMFKTAHQLDPSATLFXNDYHVEDGCDTRSSPEKYIQHILDLQQQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGIPIWFTELDVSSINEYVRADDLEVMLREAMAHPAIDGVMLWGFWELFMSRENSHLVNAEGELNEAGKRFLALKQEWLSHSHGYADAQGEFSFRGFSGTYIVEVVTLAKKVSKTFVVDKGDSSTVVSIDLDDENIIINPHFDDGLNNWSGRGCKIAVHDSVGDGKILPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVTTSDVRTTLWVQEQDLREQYIGIANVQATDKDWVQMQGKFLLNGSPSKVVVYLEGPSPGTDILVNNLVVKHAAKTPPSTPPDCEIAAFGVNIIENSNLDDGTNGWFPLGSCTLSVGSGSPRIIPSMARESLGPHESLSGHYIHVTNRTQIWMGPTQIITEKLKLFLTYQVSAWVRIGSGSNGPQNVNVALNVDNQWVNVGQVEIADGRWHEIGGSFRIEKQASKVMVSIQGPASGVDLMIAGLQIFAVDRQARFKYLRRQTEKIRKRDITLKFSGLDSIGNLGTLVRVRQIQNDFPIGTCISRSNIDNEDFVDFFVKHFNWAVFGNELKWFWTEPQQGKLNYKDADEMLDLCQKNKIDTRGHCIFWEVDSTVQQWIKSLNKTDLMKAVQNRMNDLLTRYNGKFRHYDVNNEMLHGSFYQDKLGKDIRANMFKTAHQLDPSATLFVNDYHVEDGCDTRSSPEKYIQHILDLQQQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGIPIWFTELDVSSINEYVRADDLEVMLREAMAHAAIDGVMLWGFWELFMSRENSHLVSAEGELNEAGKRFLTLKQEWLSHSHGYADAQGEFSFRGFSGTYNVEVVTLAKKVSKTFVVDKGDSSIVVSIDL 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03330 1450 SUPERFAMILY (Trans)glycosidases 1101 1401 IPR017853 -
Viun9g03330 1450 PANTHER GLYCOSYL HYDROLASE 175 726 IPR044846 GO:0004553|GO:0005975
Viun9g03330 1450 Gene3D Glycosidases 1100 1391 - -
Viun9g03330 1450 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1098 1393 IPR001000 GO:0004553|GO:0005975
Viun9g03330 1450 SMART glyco_10 1144 1394 IPR001000 GO:0004553|GO:0005975
Viun9g03330 1450 SMART glyco_10 426 676 IPR001000 GO:0004553|GO:0005975
Viun9g03330 1450 SUPERFAMILY Galactose-binding domain-like 16 172 IPR008979 -
Viun9g03330 1450 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 603 613 IPR031158 -
Viun9g03330 1450 FunFam Glycosyl hydrolase family 10 protein 731 887 - -
Viun9g03330 1450 FunFam Endo-1,4-beta-xylanase A 1099 1401 - -
Viun9g03330 1450 SUPERFAMILY Galactose-binding domain-like 187 347 IPR008979 -
Viun9g03330 1450 Coils Coil 658 678 - -
Viun9g03330 1450 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 380 675 IPR001000 GO:0004553|GO:0005975
Viun9g03330 1450 FunFam Glycosyl hydrolase family 10 protein 13 169 - -
Viun9g03330 1450 SUPERFAMILY Galactose-binding domain-like 734 888 IPR008979 -
Viun9g03330 1450 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 1321 1331 IPR031158 -
Viun9g03330 1450 Gene3D Glycosidases 380 687 - -
Viun9g03330 1450 SUPERFAMILY Galactose-binding domain-like 905 1065 IPR008979 -
Viun9g03330 1450 SUPERFAMILY (Trans)glycosidases 383 683 IPR017853 -
Viun9g03330 1450 FunFam Endo-1,4-beta-xylanase A 381 683 - -
Viun9g03330 1450 Pfam Carbohydrate binding domain 18 154 IPR003305 GO:0016798
Viun9g03330 1450 Pfam Carbohydrate binding domain 189 332 IPR003305 GO:0016798
Viun9g03330 1450 Pfam Carbohydrate binding domain 907 1050 IPR003305 GO:0016798
Viun9g03330 1450 Pfam Carbohydrate binding domain 736 873 IPR003305 GO:0016798
Viun9g03330 1450 Gene3D - 11 169 - -
Viun9g03330 1450 Gene3D - 901 1063 - -
Viun9g03330 1450 Gene3D - 732 888 - -
Viun9g03330 1450 Gene3D - 183 344 - -
Viun9g03330 1450 Pfam Glycosyl hydrolase family 10 389 646 IPR001000 GO:0004553|GO:0005975
Viun9g03330 1450 Pfam Glycosyl hydrolase family 10 1107 1364 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03330 Viun-Chr9 39954490 39963537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03330 13 732 Glycoside Hydrolase AT1G58370 74.100 0.0 1153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03330 - - vun:114163722 2959.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03330 9 39954490 39963537 Viun9g03330 9 39954490 39963537 ECH
Viun8g00453 8 3332187 3337982 Viun9g03330 9 39954490 39963537 PCT