Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03301 ATGGAACGTGCACGGAGGCTAGCAAATAGGGCAATTCTAAAGAAACTGGTTTCTTCCACGAAGGATCATTCCCATTCACGGCGTCTGTCGTATGTTTCTCATTCCTTTGCAAGAACCAAACAAGAAAACTTGATCGGAAACAACAGACACCATGCATGCAATGTAACATCTCGATCCATTTCAGTGGAGGCACTCAAGCCCAGCGACACGCTCCCTCGGCGTCACAACTCTGCCACCTCCGATGAACTAACCAAAATGGCACAGACATGCGGCTTCGGCAATGTCAACTCCCTCATCGACGCCACCATTCCCAAATCCATCCGACGGAAAGAAATGTCGTTCAACACCTTCGATGAGGGACTGGCAGAGTCCGAAATGACGTTGCACATGAAGAGCTTGGAATCAAAGAACAAATGCTTCAAGTCCTACATCGGGATGGGGTACTACAACACGCACGTGCCACCCGTGATCTTTCGGAACATCATGGAGAACCCTGCGTGGTACACTCAGTACACTCCGTACCAGGCTGAGATCTCTCAGGGTCGTCTCGAGTCCCTCATGAATTACCAAACCATGGTCACAGATCTCACCGCTCTTCCAATGGCCAACTCTTCGTTGCTCGATGAAGGAACTGCGGCTGCTGAAGCAATGTCGATGTGTAACAACATTCACAGGGGGAAGAGGAAGACCTTTGCCATAGCCAATAACTGTCACCCTCAAACTATTGATATTTGCATGACTAGAGCAACTGGTTTCGGGATTAAGGTTGTTGTTGTGGACGTTAACGATGTGGATTACGGATCCGGTGATGTTTGTGGAGTTCTTGTTCAGTATCCGGGGACTGAGGGTGAGGTTTTGGACTATGGGGAGTTTGTTAAGGAGGCTCATGCACATGGAGTTAAGGTTGTTATGGCGGCTGATTTGTTGGGTCTAACGATGTTGAAGCCTCCTGGGGAACTTGGTGTGGATATTGTTGTTGGGTCTACTCAGAGGTTTGGGGTTCCAATGGGTTATGGGGGTCCACATGCTGCGTTCCTGGCCACATCACAAGAGTATAAAAGGTTGGTGCCTGGAAGGATCATTGGGCTCAGTGTTGATTCTTGTGGAAAGTCGGCTTTCAGAATGGCCTTGCAAACTAGGGAGCAGCATATCCGCAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCATTGCTTGCAAACATGGCTGCTATGTATGTTGTGTATCATGGACCTGAAGGACTTAAAACCATTGCCCAACGAGTTCATGGCCTGGCTGGGGTCTTTGCCCTGGGATTGAAGAAACTTGGTACCGTGGAAGTTCAGGACCTTCCCTTCTTTGACACTGTGAAAATTAAGACAACCAATGCTCAAGAAATTGTTGATGTTGCTCGCAAAAGTGAAATAAATTTGCGGGTTGTTGATGGGAACACAATCACTGTTGCCTTTGATGAAACAACAACCTTGGAGGATGTTGATAACCTTTTCAAAGTATTTTCTAATGGCAAGCATGTATCCTTCACAGCTACCTCTCTTGCACCAGAAGTTCAGAATGCAATTCCTTCAGGACTAATTAGGAAGAGTCCTTATCTAACACACCCTGTCTTTAACATGTACCACACTGAGCATGAGATGCTCAGGTACATTCATAGGCTACAATCGAAAGATCTTTCATTGTGCCATAGTATGATCCCCTTGGGATCATGTACAATGAAGTTGAATGCAACCACTGAAATGATGCCTGTGACATGGCCTAACTTTGCTAACATTCACCCTTTTGCACCAATCGAACAGGCTCAAGGTTATCAGGAAATGTTCAAAAATTTGGGTAGCATGTTGTGCGCAATCACTGGATTTGACTCCTTCTCTTTGCAACCTAATGCGGGTGCCGCTGGAGAATACGCTGGATTGATGATTATTCGTGCATATCACTTGGCAAGAGGAGACCACCACCGCAACATTTGCATTATACCAGTTTCTGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTATCAATCGGAACTGATGCAAAGGGAAACATCAATATTGAAGAGTTGAGGAAGGCTGCTGAAACACACAAGGACAACTTATCTACGCTTATGGTAACATATCCTTCAACTCATGGTGTTTACGAAGAAGGCATTGATGAGATATGCAAGATTATTCATGATAACGGAGGACAAGTATATATGGATGGTGCTAACATGAATGCACAGGTGGGACTTACAAGCCCAGGAAGGATTGGAGCAGATGTTTGCCATCTGAATCTCCACAAAACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGAGTAAAGAAACACTTGGCACCATTTTTACCTTCACATCCAGTGGTTCCCACTGGTGGCATTCCTTCCCCTGACAAAAGACAACCAGTTGGTACCATTTCAGCAGCACCATGGGGCTCAGCTCTGATACTACCAATCTCGTACTCTTACATAGCCATGATGGGTTCTAAAGGACTCACCGAAGCCTCAAAAACAGCAATTTTGAAGGCAAACTATATGGCAAAACGATTGGAGACTCATTATCCTGTTCTTTACCGTGGAGCGAATGGAACTGTTGCTCATGAATTCATCATTGACTTAAGAGGCTTTAAGAACACTACTGGGATAGAACCTGAGGATGTTGCAAAGCGGCTTATAGACTATGGCTTCCATGGACCCACCATGTCATTTCCTGTGTCTGGCACACTTATGATTGAACCCACCGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATTCGGCAAGAAATTGCTGAGATTGAGAATGGAAAGGCTGACATCAAAAACAATGTACTAAAGGGTGCCCCTCACCCACCATCACTGCTCATGGCAGATACATGGACAAAACCTTACTCTCGAGAATATGCAGCATTCCCAGCTTCCTGGCTTCGTTTTTCTAAGTTCTGGCCATCCACTGGACGTATTGATAATGTGTACGGTGACCGGAACTTGGTTTGCACCCTTCCCACAGATTCAAAGGTTGCTGAAGAACAAAGTTCCACAACAACGTAA 3096 0.459 MERARRLANRAILKKLVSSTKDHSHSRRLSYVSHSFARTKQENLIGNNRHHACNVTSRSISVEALKPSDTLPRRHNSATSDELTKMAQTCGFGNVNSLIDATIPKSIRRKEMSFNTFDEGLAESEMTLHMKSLESKNKCFKSYIGMGYYNTHVPPVIFRNIMENPAWYTQYTPYQAEISQGRLESLMNYQTMVTDLTALPMANSSLLDEGTAAAEAMSMCNNIHRGKRKTFAIANNCHPQTIDICMTRATGFGIKVVVVDVNDVDYGSGDVCGVLVQYPGTEGEVLDYGEFVKEAHAHGVKVVMAADLLGLTMLKPPGELGVDIVVGSTQRFGVPMGYGGPHAAFLATSQEYKRLVPGRIIGLSVDSCGKSAFRMALQTREQHIRRDKATSNICTAQALLANMAAMYVVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKIKTTNAQEIVDVARKSEINLRVVDGNTITVAFDETTTLEDVDNLFKVFSNGKHVSFTATSLAPEVQNAIPSGLIRKSPYLTHPVFNMYHTEHEMLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPNFANIHPFAPIEQAQGYQEMFKNLGSMLCAITGFDSFSLQPNAGAAGEYAGLMIIRAYHLARGDHHRNICIIPVSAHGTNPASAAMCGMKIVSIGTDAKGNINIEELRKAAETHKDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGRIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPSPDKRQPVGTISAAPWGSALILPISYSYIAMMGSKGLTEASKTAILKANYMAKRLETHYPVLYRGANGTVAHEFIIDLRGFKNTTGIEPEDVAKRLIDYGFHGPTMSFPVSGTLMIEPTESESKAELDRFCDALISIRQEIAEIENGKADIKNNVLKGAPHPPSLLMADTWTKPYSREYAAFPASWLRFSKFWPSTGRIDNVYGDRNLVCTLPTDSKVAEEQSSTTT 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03301 1031 Gene3D Aspartate Aminotransferase, domain 1 143 496 IPR015422 GO:0003824
Viun9g03301 1031 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 154 414 - -
Viun9g03301 1031 Coils Coil 938 958 - -
Viun9g03301 1031 CDD GDC-P 543 938 IPR020581 GO:0004375|GO:0006546
Viun9g03301 1031 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 831 969 - -
Viun9g03301 1031 Gene3D - 582 833 IPR015421 GO:0003824
Viun9g03301 1031 Gene3D - 154 414 IPR015421 GO:0003824
Viun9g03301 1031 Gene3D Aspartate Aminotransferase, domain 1 834 969 IPR015422 GO:0003824
Viun9g03301 1031 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 582 821 - -
Viun9g03301 1031 CDD GDC-P 123 500 IPR020581 GO:0004375|GO:0006546
Viun9g03301 1031 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 55 1021 IPR020581 GO:0004375|GO:0006546
Viun9g03301 1031 NCBIfam aminomethyl-transferring glycine dehydrogenase 74 1015 IPR003437 GO:0004375|GO:0006544
Viun9g03301 1031 SUPERFAMILY PLP-dependent transferases 74 499 IPR015424 -
Viun9g03301 1031 Coils Coil 690 710 - -
Viun9g03301 1031 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 65 1022 IPR003437 GO:0004375|GO:0006544
Viun9g03301 1031 SUPERFAMILY PLP-dependent transferases 519 1017 IPR015424 -
Viun9g03301 1031 FunFam Glycine cleavage system P protein 408 496 - -
Viun9g03301 1031 Pfam Glycine cleavage system P-protein 517 793 IPR020581 GO:0004375|GO:0006546
Viun9g03301 1031 Pfam Glycine cleavage system P-protein 74 500 IPR020581 GO:0004375|GO:0006546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03301 Viun-Chr9 39816754 39821653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03301 K00281 - gmx:100795673 1831.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03301 9 39816754 39821653 Viun9g03301 9 39816754 39821653 ECH
Viun8g00503 8 3625086 3631222 Viun9g03301 9 39816754 39821653 PCT