Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00503 ATGGAACGTGCTCGGAGGCTTGCGAACCGCGCCATTCTGAAGCGTCTGGTTTCAGAGGCAAAGCAGCACCAGAAGAATGAATCCGTACTGCACTCTTCCACCACCCCCATGTTGCTGTACTCTTCCTCCAGGTGCATGTCCTCTGTTTCATCCGCTGCGGTGAGAAACAGAGGATCCAGAACAGAGACCCTTCTGGGAAGGAGCATGAACATCGCCACCGTGTCACGCGGCGGCGTTGTTGGTGGCTTCCTTGGTGTCGGTTCAACCCGATCCATCTCGGTGGAAGCGCTTCAACGGAGTGACACTTTCCCCAGGCGCCATAACTCTGCCACCCCAGAGGAACAGAGCAAGATGGCAGAGTCATGTGGGTTTGAGAGTCTGGATTCTCTGGTGGATGCCACTGTGCCTAAGTCGATCCGGTTGAAGGAGATGAAGTTCGGGAAATTCGACGGAGGGTTGACAGAGAGCGAGATGATTGAGCACATGAAGGAGTTGGCCTCAAAGAACAAGGTTTTCAAGTCCTACATTGGGATGGGGTACTACAACACTCATGTTCCACCAGTGATCTTGAGGAACATAATGGAGAACCCTGCTTGGTACACTCAGTACACTCCTTACCAGGCTGAGATATCTCAGGGGAGGCTTGAGTCACTGCTGAATTACCAGACCATGATAACTGACCTCACTGGCTTGCCCATGTCCAATGCTTCATTGCTTGATGAGGGCACAGCTGCAGCTGAGGCAATGTCCATGTGCAATCACATCCAAAAGGGGAAGAAGAAGACCTTCATCATTGCAAGCAACTGCCACCCTCAGACCATTGATATTTGCAAGACAAGGGCTGCTGGATTTGATCTGAAGGTTGTGACAGCAGATCTTAAGGATATTGATTACAAATCTGGGGATGTGTGTGGTGTGCTTGTGCAGTACCCTGGGACTGAGGGTGAGGTGTTGGACTATGGGGAGTTCATCAAGAAGGCTCATGCTCATGAGGTGAAGGTTGTTATGGCTAGTGATCTGTTGGCACTCACTGTGTTGAAGCCTCCTGGGGAGTTGGGTGCAGATATTGTTGTGGGATCAGCTCAGAGGTTTGGAGTTCCAATGGGCTATGGAGGTCCTCATGCAGCTTTCTTGGCCACATCACAAGAGTACAAGAGGATGATGCCAGGGAGAATCATTGGAGTCAGTGTTGATTCTACCGGCAAGACTGCTTTGAGGATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCCCAGGCACTTCTTGCAAACATGGCTGCTATGTATGCTGTGTATCATGGACCTGAAGGCCTTAAGAACATTGCACACCGTGTTCACGGTCTTGCTGGGGCACTTGCTCTTGGATTAAAGAAACTTGGAACTGTGGAAGTTCAAGACCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTTCCAATGCACATGCGATTGCTGATGCAGCTATCAAAAGTCAAATAAATTTGCGAGTTGTAGACGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGATAAGCTTTTCAAAGTCTTTGCTGGTGGAAAGCCAGTCCCCTTCACGGCTGCATCTATTGCACCAGAAGTTCAAAGTGCAATTCCTTCTGGATTAACTAGGAATAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTTAGGTACATGTATAGGCTACAATCAAAAGATCTCTCACTATGTCACAGTATGATTCCATTGGGATCCTGTACAATGAAGCTGAATGCAACCACAGAAATGATGCCTGTGACATGGCCCAGCTTTTCTGATATTCACCCTTTTGCACCAGTTGACCAGGCTGAAGGTTATCAGGAAATGTTCAACAATTTGGGTGACTTGTTGTGTACCATCACCGGGTTTGACTCCTTCTCCTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTTATGGTTATCCGTGCATATCATCTGGCAAGAGGTGACCATCACCGCGATGTTTGCATTATACCTGTCTCAGCACATGGTACAAATCCTGCTAGTGCTGCAATGTGTGGAATGAAAATTGTCTCAGTTGGAACTGATGCCAAGGGAAACATTAATATAGAAGAGTTGAGGAAGGCTGCTGAAAAACACAAGGACAACTTATCTGCACTTATGGTAACATATCCTTCAACCCACGGTGTTTATGAGGAAGGTATTGATGAGATTTGCAAGATTATTCATGATAATGGTGGTCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGACTCACAAGCCCAGGTTGGATAGGAGCAGATGTTTGTCATCTCAATCTCCACAAGACATTCTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCCCACCCTGTGATATCAACTGGTGGAATTCCTGCCCCTGAAAACCCTCAACCACTTGGTACCATCTCTGCTGCACCATGGGGATCAGCACTCATATTGCCAATCTCTTACACTTACATAGCTATGATGGGTTCTCAAGGACTCACTGATGCATCAAAGATAGCCATTTTGAATGCAAACTACATGGCCAAACGATTGGAGAACTATTACCCAGTTCTTTTCCGTGGAGTCAATGGAACAGTTGCTCATGAGTTCATTATTGACTTGAGAGGCTTCAAGAATACTGCTGGAATTGAGCCTGAAGATGTTGCAAAACGGCTCATGGACTATGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACTCTCATGATTGAGCCTACAGAGAGTGAAAGCAAGGCCGAGTTGGACAGGTTCTGTGATACTCTTATTTCAATCAGACAGGAAATTGCTGATATAGAGAAAGGAAAGGCTGACATCAACAACAATGTGCTTAAGGGAGCTCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAACCATACTCAAGGGAATATGCAGCCTTCCCAGCTCCATGGCTCCGTGCTTCAAAGTTCTGGCCTACCACAGGACGTGTTGATAATGTGTATGGAGACCGCAACCTCATTTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAAGAAGCTGCAGCCACAGCATAG 3192 0.4743 MERARRLANRAILKRLVSEAKQHQKNESVLHSSTTPMLLYSSSRCMSSVSSAAVRNRGSRTETLLGRSMNIATVSRGGVVGGFLGVGSTRSISVEALQRSDTFPRRHNSATPEEQSKMAESCGFESLDSLVDATVPKSIRLKEMKFGKFDGGLTESEMIEHMKELASKNKVFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNHIQKGKKKTFIIASNCHPQTIDICKTRAAGFDLKVVTADLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHAHEVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSTGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNIAHRVHGLAGALALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAAIKSQINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVPFTAASIAPEVQSAIPSGLTRNSPYLTHPIFNTYQTEHELLRYMYRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFSDIHPFAPVDQAEGYQEMFNNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRDVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIEELRKAAEKHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVISTGGIPAPENPQPLGTISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDTLISIRQEIADIEKGKADINNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRASKFWPTTGRVDNVYGDRNLICTLLPASQAVEEEAAATA 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00503 1063 Gene3D Aspartate Aminotransferase, domain 1 862 1001 IPR015422 GO:0003824
Viun8g00503 1063 Pfam Glycine cleavage system P-protein 550 825 IPR020581 GO:0004375|GO:0006546
Viun8g00503 1063 Pfam Glycine cleavage system P-protein 106 532 IPR020581 GO:0004375|GO:0006546
Viun8g00503 1063 SUPERFAMILY PLP-dependent transferases 106 533 IPR015424 -
Viun8g00503 1063 CDD GDC-P 155 532 IPR020581 GO:0004375|GO:0006546
Viun8g00503 1063 Gene3D - 615 843 IPR015421 GO:0003824
Viun8g00503 1063 Gene3D - 186 446 IPR015421 GO:0003824
Viun8g00503 1063 FunFam Glycine cleavage system P protein 439 528 - -
Viun8g00503 1063 NCBIfam aminomethyl-transferring glycine dehydrogenase 106 1047 IPR003437 GO:0004375|GO:0006544
Viun8g00503 1063 SUPERFAMILY PLP-dependent transferases 565 1048 IPR015424 -
Viun8g00503 1063 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 89 1053 IPR020581 GO:0004375|GO:0006546
Viun8g00503 1063 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 97 1054 IPR003437 GO:0004375|GO:0006544
Viun8g00503 1063 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 614 853 - -
Viun8g00503 1063 Gene3D Aspartate Aminotransferase, domain 1 175 528 IPR015422 GO:0003824
Viun8g00503 1063 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 863 1001 - -
Viun8g00503 1063 CDD GDC-P 575 970 IPR020581 GO:0004375|GO:0006546
Viun8g00503 1063 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 186 446 - -
Viun8g00503 1063 Coils Coil 722 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00503 Viun-Chr8 3625086 3631222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00503 K00281 - gmx:100819714 2005.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00503 8 3625086 3631222 Viun9g03301 9 39816754 39821653 PCT