Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03167 ATGGCGGTTTGGAGATCTCTCGCTTTCTCTGCGGTTCTTCTGCTTCTCATCCATGGCGCTCACTGCTTCTACCTCCCCGGAGTCGCTCCACAGGACTTCCAGAAGGGAGATCAATTGCAAGTGAAAGTAAATAAATTAACGTCAACAAAGACCCAGCTTCCATATTCATATTATTCACTTCCTTATTGCACCCCAGAAAAAATACAGGACAGTACAGAAAATCTTGGAGAAGTGCTTCGTGGTGACCGCATTGAAAATTCCCTTTATTCGTTTAAAATGCGTGAGCCACAAATGTGCAATATTGTGTGTAATGTTAAACTTGATGCTAAAACTGCCAAGGAGTTCAAAGAGAAGATCAGTGACGAGTATAGGGTGAACATGATTCTTGATAACCTTCCCCTAGTTGTTCCCTTGAAACGAAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTACAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTACCATAAAGACGTCCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTCAAGCCATTCAGTGCTAAACATGAATACGAAGGTAAATGGGAAGGAAAAACAACTCGTTTAACAACCTGTGACCCTCATGCTAAAAGCACAGTGGTCAACTCCAACTCTCCCCAAGAGGTTGAAGAGGGCAAGGAAATTATCTTTACCTATGATGTTGAATTTCAGGAGAGTGATGTGAAGTGGGCATCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCGGGCATGGTGGCAATGATAATGCTGCGTACACTGTACCGTGACATTGCGAAATATAACGAGCTTGAGACCCAAGAAGAAGCGCAGGAGGAGACTGGTTGGAAGCTTGTCCATGGTGATGTGTTTAGGCCCCCCACTAACTCAGATTTGCTGTGCGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGTATGATGCTGGTAACCATGATGTTTGCTGTCCTTGGATTCCTTTCACCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATATTTGCCGGTTACTCATCAACTCGTTTGTACAAAATGTTCAAAGGATCGGAGTGGAAAAAAGTTGCCCTCAGAACTGCAACCATGTTCCCTGCCATTGTCTCTGCCATTTTCTTTGTTTTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTGGGTAGCTATGTCGGATTCAAGAAGCCTGCGATTGAGAGTCCTGTGAAAACGAACAAGATCCCCAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTTTTCTCAGTTTTGATCGGTGGAATACTCCCGTTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACATCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATTGTGACTTGTGCTGAAATTACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGATCATATCTTACCTCTGGTTCCTCTGCACTTTACCTCTTTCTTTACGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCGATATTTTACTTTGGGTACATGCTTATAGCTTCTTATGCATTTTTTGTGGTGACCGGTACTATCGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATCTACTCCTCCGTCAAAATTGATTAG 1911 0.428 MAVWRSLAFSAVLLLLIHGAHCFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYSYYSLPYCTPEKIQDSTENLGEVLRGDRIENSLYSFKMREPQMCNIVCNVKLDAKTAKEFKEKISDEYRVNMILDNLPLVVPLKRNDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHKDVLTESARIVGFEVKPFSAKHEYEGKWEGKTTRLTTCDPHAKSTVVNSNSPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMMFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKKVALRTATMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIESPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03167 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016020
Viun9g03167 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 636 IPR004240 GO:0016020
Viun9g03167 636 SUPERFAMILY MFS general substrate transporter 275 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03167 Viun-Chr9 39033950 39038084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03167 8 636 Miscellaneous Gene Families AT5G10840 85.261 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03167 K17086 - gmx:100780976 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03167 9 39033950 39038084 Viun9g03167 9 39033950 39038084 ECH
Viun8g00613 8 4666488 4671197 Viun9g03167 9 39033950 39038084 PCT