Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00613 ATGGCGTTTTGGAGGTCCCTGGCGTTCTCCGCGATTCTTCTTCCACTCTTCATCCATGGCGCACTCTGCTTCTACCTCCCTGGCGTTGCACCACAGGACTTCCAGAAGGGAGATTCATTGCAAGTAAAAGTAAACAAATTAACGTCAACAAAGACCCAGCTTCCATATACATATTATTCTCTTCCGTACTGTGCACCAGAGAAAATAGTGGATAGCGCTGAAAATCTTGGAGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCGATATGTGTTTAAGATGCGTGAACCACAAATGTGCAATATTGTTTGTAAGCTTAAACTTGATGCCAAAACTGCAAAAGAATTCAAAGAGAAGATTGATGATGAGTATCGAGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGGTGGAACCGGACTCTACTGTTTATCAACTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAGCAAGGAGGAAAAGCATTTTATTCACAACCATTTGGCCTTTACTGTCAAGTATCATAGAGATACACTTACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCTTTCAGTGTTAAACACGAATTTGAAGGGAAGTGGGATGAACAGGCCACCCGTTTGACAACCTGTGACCCTCATGCCAAACACACAGTTGTGAATTCCAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCGGGTATGGTAGCAATGATAATGCTTCGTACGCTTTACCGTGATATTTCAAAGTACAATGAGTTAGAAACCCAAGAAGAAGCACAGGAAGAGACGGGTTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAACAACCCAGATTTGCTATGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGATAGTAGTAACAATGATGTTTGCTGTCCTGGGGTTTCTTTCTCCTTCAAACCGCGGTGGGCTAATGACGGTCATGCTCTTGCTTTGGGTTTTCATGGGAATTTTCGCTGGTTTTGCCTCGGCTCGCTTATATAAAATGTTCAAAGGAGCAGAGTGGAAGAAAATTGCCCTCAAAACTGCAATCATGTTCCCTGGAATCGTTTCTGCCATTTTCTTTGTATTAAATGCTCTGATATGGGGACAAAAATCGTCTGGAGCAGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATATCGGTTCCACTTGTTTTTGTTGGTGCCTATGTTGGATTTAAGAGGCCTGCAACTGAAAATCCTGTGAAGACAAACAAAATCCCGAGGCAGATCCCTGAGCAGGCATGGTACATGAACCCAGTCTTCTCAATTCTGATCGGAGGAATACTTCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTTATCCTCACTTCAATATGGTTGAATCAGTTCTACTACATCTTCGGCTTCCTCTTCTTGGTCTTTGCCATCCTCATTGTCACTTGTGCTGAGATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCTTACCTCACATCTGGCTCATCTGCTTTTTATCTATTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTATTGTACTTCGGTTACATGCTTATAGCTTCCTATGCCTTCTTCGTTGTAACTGGATCCATCGGATTTTATGCATGCTTTTGGTTCACAAGGCTCATCTATTCCTCGGTCAAGATTGATTAG 1914 0.4227 MAFWRSLAFSAILLPLFIHGALCFYLPGVAPQDFQKGDSLQVKVNKLTSTKTQLPYTYYSLPYCAPEKIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVEPDSTVYQLGFHVGLKGQYTGSKEEKHFIHNHLAFTVKYHRDTLTESARIVGFEVKPFSVKHEFEGKWDEQATRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNPDLLCVYVGTGVQFFGMIVVTMMFAVLGFLSPSNRGGLMTVMLLLWVFMGIFAGFASARLYKMFKGAEWKKIALKTAIMFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKRPATENPVKTNKIPRQIPEQAWYMNPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSAFYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGSIGFYACFWFTRLIYSSVKID 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00613 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016020
Viun8g00613 637 SUPERFAMILY MFS general substrate transporter 275 463 IPR036259 -
Viun8g00613 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 637 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00613 Viun-Chr8 4666488 4671197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00613 11 637 Miscellaneous Gene Families AT5G10840 84.738 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00613 K17086 - gmx:100810506 1227.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00613 8 4666488 4671197 Viun8g00613 8 4666488 4671197 ECH
Viun8g00613 8 4666488 4671197 Viun9g03167 9 39033950 39038084 PCT