Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03163 ATGCTTCGGTTCCTTGTGTCGGTTCTCGTGTTGGCAAGTTGCAAGGAGGTTCAAAAAATGGCGAAAGCACAGTACACAGTAGATTCAGCAAGAGCGTGTTTGGTTAGACAAGAAGACACTATCATATTTGCTTTGATCGAAAGGGCAAAGTTTCCCTTGAATTCCCCAACCTATAATCACACTTTCACTTCCATTTCCCAGATTCAAGGTTCACTGCTTCACTTCTTCATTCGCAACACAGAAGCAATTCAATCTAAGGCAGGTAGATACACTAATCCTGAAGAAATTCCGTTCTTCCCAGAAAATTTACCTCCCTCGGTTGCACCATATTACCCCTCCTCAGAGTTTTTGCATTCTGCAGGTGCTTTGATTAACATAAACAAGGACATTTGGAAACTGTACTTTCATGTGCTGCTTCCGATGTTTGTTGCTTCCGGTGATGATGGAAACTACGCACAAACTGCTGCTGCCGATCTTACGTTGTTGCAGGCCATCTCTAGAAGGATTCATTATGGAAGATTCGTTGCTGAGGCCAAATTTAGAGAAACTCCTCAAATCTTCGAGTCTTTAATTCGTGCCAAGGACAGGAAAGCATTGATGAAAGTGTTGACATTGGAGAGCATCGAAAAGATGGTGGTGAAGAGGGTTGAAAAGAAGGCCATGGTGTTTGGACATGAAGTGAGTCTTGAACATGTGAAGGAAGGTACGTACAAGGTTGATCCATCTGTGGTTTCTCTGTTGTACCAGAAATGGTTGATACCACTCACAAAAAATGTTGAACTCGAATACTTACTAAGACGTCTCGATTGA 810 0.4247 MLRFLVSVLVLASCKEVQKMAKAQYTVDSARACLVRQEDTIIFALIERAKFPLNSPTYNHTFTSISQIQGSLLHFFIRNTEAIQSKAGRYTNPEEIPFFPENLPPSVAPYYPSSEFLHSAGALININKDIWKLYFHVLLPMFVASGDDGNYAQTAAADLTLLQAISRRIHYGRFVAEAKFRETPQIFESLIRAKDRKALMKVLTLESIEKMVVKRVEKKAMVFGHEVSLEHVKEGTYKVDPSVVSLLYQKWLIPLTKNVELEYLLRRLD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03163 269 PIRSF Chor_mut_AroQ_eu 14 269 IPR008238 GO:0004106|GO:0009073
Viun9g03163 269 ProSiteProfiles Chorismate mutase domain profile. 18 269 IPR008238 GO:0004106|GO:0009073
Viun9g03163 269 FunFam Chorismate mutase 18 269 - -
Viun9g03163 269 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 20 269 IPR037039 GO:0004106|GO:0009073
Viun9g03163 269 PANTHER CHORISMATE MUTASE 14 269 IPR008238 GO:0004106|GO:0009073
Viun9g03163 269 SUPERFAMILY Chorismate mutase II 24 269 IPR036263 GO:0046417
Viun9g03163 269 NCBIfam chorismate mutase 27 269 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03163 Viun-Chr9 39010954 39013080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03163 K01850 - gmx:100791095 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03163 9 39010954 39013080 Viun9g03163 9 39010954 39013080 ECH
Viun8g00619 8 4727030 4729915 Viun9g03163 9 39010954 39013080 PCT