Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00619 ATGATGCATCGGTTTCCATTGGTGATTCTTGTGTTGACAATATGTGGCGTGAGATGCAGAATGGCGAAAGCAGATGAAAATGTGTACACGCTGGCTTCGGTTAGGGAAAATTTGATTAGGCAAGAGGATACCATTATTTATGGTCTCATTGAGAGAGCCAAGTTTCCTTCCAATTCTCACACCTATGATGATAAGTATGCTCAAATCCCTGGTTTTTCTGGCTCATTGGTGGAATTTGTTATTAAAAATACCGAGGACGTTCAAGCTAAGGCTGGAAGATACACAAACCCTGAAGAAAACCCATTCTTCCCTGAAAAGTTACCACCATCAAGTGTGCCATCTTACCCCTTCTCACAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATAAACAAGTCCATCTGGAAAATGTATCTGCAAGATTTACTTCCATTGCTTGCTAATTCGGGTGATGATGGCAACTATGCGCAAACTGCTGCGACTGATCTTTCGTTATTGCAGGCTATCTCAAGAAGGATTCATTATGGAAAGTTTGTGGCTGAGGTAAAATTCAGGGATGCTCCTCAAGACTATGAACCTTTAATTCGAGCTAAGGATAGAGAAGGTTTGATGAAATTGTTGACATTTACGAGCGTTGAAGAGACAGTGAGGAAGAGGGTTGAAAAGAAGGCCACAGTGTTTGGTCAAGAAGTAAGTCTTGACAGTGATAATGATGGCAAAGAGAAAAGTAAGTTTGACCCAACAGTGGCTTCTCGTTTGTACAAAGATTGGGTGATACCTCTCACCAAGGAGGTTCAGGTTGAGTACCTCTTGCGCCGTATAGACTGA 828 0.4191 MMHRFPLVILVLTICGVRCRMAKADENVYTLASVRENLIRQEDTIIYGLIERAKFPSNSHTYDDKYAQIPGFSGSLVEFVIKNTEDVQAKAGRYTNPEENPFFPEKLPPSSVPSYPFSQFLHPGAASININKSIWKMYLQDLLPLLANSGDDGNYAQTAATDLSLLQAISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDREGLMKLLTFTSVEETVRKRVEKKATVFGQEVSLDSDNDGKEKSKFDPTVASRLYKDWVIPLTKEVQVEYLLRRID 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00619 275 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 23 275 IPR037039 GO:0004106|GO:0009073
Viun8g00619 275 NCBIfam chorismate mutase 30 275 IPR008238 GO:0004106|GO:0009073
Viun8g00619 275 FunFam Chorismate mutase 22 275 - -
Viun8g00619 275 SUPERFAMILY Chorismate mutase II 26 275 IPR036263 GO:0046417
Viun8g00619 275 PANTHER CHORISMATE MUTASE 24 275 IPR008238 GO:0004106|GO:0009073
Viun8g00619 275 PIRSF Chor_mut_AroQ_eu 18 275 IPR008238 GO:0004106|GO:0009073
Viun8g00619 275 ProSiteProfiles Chorismate mutase domain profile. 22 275 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00619 Viun-Chr8 4727030 4729915 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00619 K01850 - gmx:100791341 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00619 8 4727030 4729915 Viun8g00619 8 4727030 4729915 ECH
Viun8g00619 8 4727030 4729915 Viun9g03163 9 39010954 39013080 PCT