Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03136 ATGCTGCGTAAGCTTGTGTCAGGGCCACGCAAGAACAAACCCGGGACCGTCCCGGTTCACCTCAACGTCTATGATCTCACCCCAATCAATGGCTATGCCTATTGGCTTGGCCTTGGTGTCTACCATTCTGGGGTTCAAGTTCACGGGGTTGAGTACGGTTTTGGTGCGCATGAGCATGACACAACGGGGATTTTCGAAGTGCAACCGAAACACTGTCCCGGGTTCACTTTCAGAAAGTCGATTTTCATCGGAACAACAGATCTGGGTGAGAAAGATGTTCGCGCGTTCATGGAGAAACTGTCTCAGGAGTACTCTGGCAACACCTATCATCTCATCTCCAAAAACTGCAACCACTTCTGCAACGATGTTTGCCTCAAGTTAACGGGAAAGTCGATCCCTCGATGGGTCAATCGCCTTGCTAGACTCGGTCTTCTTTGCAACTGTGTTCTTCCCCCTGGCCTAAATGACACAAAGGTTCAACAACCTACATCAGAGAGAGTTCAGGAGGGAGAAAAGAGGAAAATAAGAAGTCAATCTTGCAGGTACGAGGGTTCTTCAAATCCTTCATTGTCTCGACGTTCGGCAATTAAAAGTAGTAGCCAAAGACATTGTCTTCCAGGATCTACATCTTTGCTTAATGCTGCTCCAGCCTCAACCTTAACAGTGAAGTAG 672 0.4792 MLRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVQQPTSERVQEGEKRKIRSQSCRYEGSSNPSLSRRSAIKSSSQRHCLPGSTSLLNAAPASTLTVK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03136 223 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Viun9g03136 223 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Viun9g03136 223 Gene3D PPPDE domains 12 173 IPR042266 -
Viun9g03136 223 PANTHER DESUMOYLATING ISOPEPTIDASE 16 197 IPR008580 GO:0008233
Viun9g03136 223 MobiDBLite consensus disorder prediction 165 179 - -
Viun9g03136 223 MobiDBLite consensus disorder prediction 157 204 - -
Viun9g03136 223 MobiDBLite consensus disorder prediction 180 204 - -
Viun9g03136 223 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03136 Viun-Chr9 38792014 38793739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03136 K22763 - gmx:100306675 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00707 8 5721319 5723738 Viun9g03136 9 38792014 38793739 PCT