Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00707 ATGTTGTGTAAACTCGTTCCTGTGCCGCGCAAGAAAAAACCCGGTTCGAACCCGGTTTACCTTAACGTCTACGATCTAACACCGATTAACGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGCGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCTCATGAACGTGACACGACTGGGATTTTTGAAGTGGAGCCTAGACGGTGTCCTGGATTCACCTTCAGGAAATCGATTTTCATTGGATCGACGGATATGGGGGCGAGGGATGTTCGTGAGTTAATGGAGAGGATGGCTGAAGACTATTCTGGGAACACCTACCACCTTATCCAGAAAAACTGCAACCATTTCTGCGATGATGTTTGTGTCAAACTAACGGGGAAGTCCACCCCTCGCTGGGTCAATCGACTTGCTAGACTTGGTTTTCTCTGCAACTGTGTTCTTCCACCCAGCCTAAATGAAACAAAGGTTCGCCAAGTTACATTAGACAGGGTTCAAGACGGAGAGAAGAAGAAAGTGAGAACGCATTCCAGCAGGTACGAGGCTTCACCCAAACCTCCATTGTCTAGTAGCCGAAGACACTGCCTTCCTCCATCTTCTGTAATTAATGCTTCTCCGTCCTCAACCATAACAGTAAAGTAA 648 0.4707 MLCKLVPVPRKKKPGSNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRRCPGFTFRKSIFIGSTDMGARDVRELMERMAEDYSGNTYHLIQKNCNHFCDDVCVKLTGKSTPRWVNRLARLGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKVRTHSSRYEASPKPPLSSSRRHCLPPSSVINASPSSTITVK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00707 215 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Viun8g00707 215 MobiDBLite consensus disorder prediction 165 215 - -
Viun8g00707 215 Gene3D PPPDE domains 12 172 IPR042266 -
Viun8g00707 215 MobiDBLite consensus disorder prediction 195 215 - -
Viun8g00707 215 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Viun8g00707 215 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Viun8g00707 215 PANTHER DESUMOYLATING ISOPEPTIDASE 16 182 IPR008580 GO:0008233
Viun8g00707 215 MobiDBLite consensus disorder prediction 165 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00707 Viun-Chr8 5721319 5723738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00707 K22763 - gmx:100786432 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00707 8 5721319 5723738 Viun9g03136 9 38792014 38793739 PCT