Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03101 ATGGCTTCCCACAAACTCCTCACCATTTTCCTGCTTTCTCTCATTTCTTACTCTTCATTCTCTCAATCTCAAGCCGATTGCCCACCCACTCCAAAGCCCGCGCCCACACCCACTCCAAAGCCCACGCCAAAGCCCGCACCCACACCCACCCCGAAGCCCACACCACCCACTCCAAAGCCCGCACCCACACCCACCCCGAAGCCCACACCACCCACTCCAAAACCCGCACCCACACCCACCCCGAAGCCCACGCCACCCACCCCAAAGCCCAGTTGCCCTCCTCCTCCATCTGCATCACCAACCTGCCCTAAAGATACCCTAAAGCTAGGTGTTTGTGCTAAGGTCTTAGGACTCGTGAACGTTATTATTGGAACTCCTCCTACGAGTGACTGTTGCGCTTTGATCAAAGACTTGGCGGATTTGGAAGCTGCGCTTTGTCTCTGCACTGCCATTAAGGCCAATGTGCTTGGAATCAACCTCAATGTTCCAGTCACGCTCAGCGCGATCCTTAGTGCGTGTCAGAAAACTGTTCCTCCTGGCTTCCAGTGTCCCTAG 555 0.555 MASHKLLTIFLLSLISYSSFSQSQADCPPTPKPAPTPTPKPTPKPAPTPTPKPTPPTPKPAPTPTPKPTPPTPKPAPTPTPKPTPPTPKPSCPPPPSASPTCPKDTLKLGVCAKVLGLVNVIIGTPPTSDCCALIKDLADLEAALCLCTAIKANVLGINLNVPVTLSAILSACQKTVPPGFQCP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03101 184 PRINTS Proline rich extensin signature 68 80 - -
Viun9g03101 184 PRINTS Proline rich extensin signature 27 39 - -
Viun9g03101 184 PRINTS Proline rich extensin signature 48 64 - -
Viun9g03101 184 SMART aai_6 102 183 IPR016140 -
Viun9g03101 184 MobiDBLite consensus disorder prediction 28 100 - -
Viun9g03101 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 105 184 IPR036312 -
Viun9g03101 184 CDD HPS_like 104 183 IPR027923 -
Viun9g03101 184 PANTHER - 8 183 - -
Viun9g03101 184 FunFam pEARLI1-like lipid transfer protein 1 100 184 - -
Viun9g03101 184 Pfam Hydrophobic seed protein 101 184 IPR027923 -
Viun9g03101 184 MobiDBLite consensus disorder prediction 20 100 - -
Viun9g03101 184 Gene3D - 100 184 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03101 Viun-Chr9 38523802 38524682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03101 91 184 Acyl Lipid Metabolism Gene Families AT4G22490 39.583 3.95e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03101 - - gmx:100526941 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03101 9 38523802 38524682 Viun9g03101 9 38523802 38524682 ECH
Viun8g00762 8 6586612 6587361 Viun9g03101 9 38523802 38524682 PCT