Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00762 ATGGCTTCCAACAAGCTTATTGCCACCATCATGCTGCTCTCTCTCCTTGCCTACACCACTTCAACCCATGCATGTGGCACATGCCATCCCCAATCTCCTCCTCCTCCATCAGGGAAGTGCCCTAAGGACACCCTAAAGCTAGGGGTTTGTGCTGACATCCTAGGACTTGTTAACGTTGTTGTTGGCTCACCTGTCTCCAGCAAGTGTTGTGCATTGCTCCAGGGTTTGGCTGATCTAGAGGCTGCACTTTGCCTCTGCACTGCCATCAAAGCCAATGTGCTTGGAATCAACCTGAATGTTCCTATCACACTCAGTGTGCTCCTCAGTGCATGCCAAAAAACTGTTCCTTCTGGTTTCCAATGTGCATAG 369 0.5014 MASNKLIATIMLLSLLAYTTSTHACGTCHPQSPPPPSGKCPKDTLKLGVCADILGLVNVVVGSPVSSKCCALLQGLADLEAALCLCTAIKANVLGINLNVPITLSVLLSACQKTVPSGFQCA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00762 122 FunFam pEARLI1-like lipid transfer protein 1 38 122 - -
Viun8g00762 122 Gene3D - 38 122 IPR036312 -
Viun8g00762 122 Pfam Hydrophobic seed protein 40 122 IPR027923 -
Viun8g00762 122 CDD HPS_like 38 121 IPR027923 -
Viun8g00762 122 SMART aai_6 40 121 IPR016140 -
Viun8g00762 122 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 43 121 IPR036312 -
Viun8g00762 122 PANTHER - 7 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00762 Viun-Chr8 6586612 6587361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00762 38 121 Acyl Lipid Metabolism Gene Families AT4G22490 39.535 1.18e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00762 - - gmx:100306307 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00762 8 6586612 6587361 Viun8g00762 8 6586612 6587361 ECH
Viun8g00762 8 6586612 6587361 Viun9g03101 9 38523802 38524682 PCT