Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03081 ATGATGGATCCAAGCAACCTTTTACCAGCCAATGGACTTGAAGAGGTCTACCAAAATGGTATAAATGGCAAATTATCTAACTCTGGAATGGATGGTATTGCCTCTAATGACCCTGCTGTCACTAAAATTACACAAACTGAAGCTTCAAATGGAATTTCTGAAAATTTCATCCAGTATGATAGCATTGCAACTGATTACTCATCCAAGGAAGAAATCAAGGAAGGATCAATTGACTACTTAGGTGTGAACAATGTCACCATTTCTAAGGAAGAAGAAGCAGAAATCGTAGAACAGACAGAGCAATCAAAAGCAGGAAAAGGTCCTGTCAAGAATAAGAATGCAAAGTCACCAAGCCCCAGAGGTGTTCATGGAAGTTCAATTAAAAAGAACAAAGATGGAAAAGGTGAAGAGGTAGCATCTACTGTTTCCAACGGTACTTTTTCTTCAGACTCTATCCCAAGACAGCATATTAAAAATAGATCATTGGTTGACAAGCAGGCTCGACTGTCGAAGCATGCTGGAAAGTCTAGCGTGGCACCTTCTGAGGCATCAATGGAGAAGAACAGACCACGATTATCAAAGAAAGGGGCCCCTGATAATCTTAATCTTCAAGGAGAAGCAGAATCTTCTTCTCCTACTGCAGAAGATGGCAAACTTCGCAGGGTAGGGATGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAACGAGCTGAGAGAAGAAGAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTCCAAGCGAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGTTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAATTTAAAAAGATGCCCACTACAAGAGCTAAATCTCCCAAACTTGGTCGTAAGAAGAATTCAGCGGTTTCTGAGACAGAAGGAAACACTAGCAATAGTGTTCGACAAAGTCGATTAAGTCTGGATGAGAAAGTGTCTCAGACTAACGTCACTAAAGGAGTTACTCTTGTTCATCAAAAGAAGCCACAACGAAAGTCTCTTCCTCCTAGGCTGACTTCTGAAAAGACCAGTTCATCCAATCGGACCCCATCTAAAGCAGTGAATGATGACAAAACCTCCTTATCAAATGTAACAACTGAAGTTACCATCTTATCCATTTCAACTGGGGAAGAGAAAGTTGAAGTAGTCGCAGCCACTGAAGACAGCAATGTCTTATTGGATGAGACAAATAAAACTCTGCCTCTGATTGTAGAGCCAAGTGAAGCTAATTCACCCGCTAAGAATGGTGATTTAGCCATTGAAGAGAAACCGCAACAACTCACCTTGTCACAAGAACCCATAGTGGCAGAGCTCTGA 1416 0.4174 MMDPSNLLPANGLEEVYQNGINGKLSNSGMDGIASNDPAVTKITQTEASNGISENFIQYDSIATDYSSKEEIKEGSIDYLGVNNVTISKEEEAEIVEQTEQSKAGKGPVKNKNAKSPSPRGVHGSSIKKNKDGKGEEVASTVSNGTFSSDSIPRQHIKNRSLVDKQARLSKHAGKSSVAPSEASMEKNRPRLSKKGAPDNLNLQGEAESSSPTAEDGKLRRVGMLPNYGFSFKCDERAERRREFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVEFKKMPTTRAKSPKLGRKKNSAVSETEGNTSNSVRQSRLSLDEKVSQTNVTKGVTLVHQKKPQRKSLPPRLTSEKTSSSNRTPSKAVNDDKTSLSNVTTEVTILSISTGEEKVEVVAATEDSNVLLDETNKTLPLIVEPSEANSPAKNGDLAIEEKPQQLTLSQEPIVAEL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03081 471 MobiDBLite consensus disorder prediction 96 221 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 439 471 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 322 356 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 369 395 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 157 171 - -
Viun9g03081 471 Coils Coil 245 275 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 286 395 - -
Viun9g03081 471 MobiDBLite consensus disorder prediction 137 156 - -
Viun9g03081 471 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Viun9g03081 471 PANTHER PROTEIN WVD2-LIKE 4 93 423 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03081 Viun-Chr9 38408886 38415921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03081 - - gmx:100804879 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03081 9 38408886 38415921 Viun9g03081 9 38408886 38415921 ECH
Viun8g00778 8 6809829 6815335 Viun9g03081 9 38408886 38415921 PCT