Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00778 ATGGATCCAATTAACCTTTTACCTGCTGATGGGGTTGAAGTGGTCCACCAAAATGGTGTCCATGATGAACCTTCAAATTCTGGGGAGGATGGTGGTGCTCCATATGATTTAGATCCCAGTGTCACTGAAACTGCAGAAACTGTTGCTTCAAATGGAAATTTTGATAATTTCCATCAGTCAGATAGTGCTGCTATTGATAACTCATTTGTGGCAGAAATCAAAGAATCAAATGACATTATCGATGGCAATAACGTGATCATTATTACCAAGGAAGAGGATACGAAAATATCAGACCAAACAAAACAATCAAGGGCACCAAAGGGTCTTGTCAAGAATAAGAATGCAAAGGCTCCAAGTTCCAGTGCAGTTCATGCAAGTTTGGTAAATAAGAGCAAAATTGGAAAAGATAAAGAAGCATCTTCATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCCCAAAACAGTCTATTAAAAGCAGCAGATCATTCAATGATCGGCAGACTCAATTGTCCAAGCCCAAGCACCCTTTGAAGTCTGATGAAGCATCTTCTGAAGTGTCAATGGAGAAGACAAAACCAAAATCATTGAGAAAAGGACCGGTTAAAGATCAAGGAGAAGAAGATTCTTCCTTAAGTACCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGCGAACGAGCTGAGAGAAGAAAAGAGTTCTATAATAAGCTTGAGGAAAGGATTCAGGCAAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCAAGTTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGCCAAAATCTCCCAAGTTTGGTCGTAAGAAGACTTCAGCTAATTCAGAATCAGATGGAAACACCAGCAGCAGTTCAAGAGTAGCTCGTTTAAGTCTGGATGAGAAAGTTTCAGAGAGTAACCCCAGCAAGGAACCTAATCCGGTCCTCCAAAAGAAACCGCTTCGAAGATCTCTTCCTTCTCGTCTGACCTCTGAAAAGAACAATGTATCAAAATCAACAACTGCACTTACACCATCCAAGGCCACCAAGAATGAAAAGTCTTCCGTATCTCGTGCTGCTAAAAAGAATATCAACATATCCAATGCTACAGGCGAAGAGAAAACCGAGACGATTGCAGCAACCGAAGAGAAAAATATCTTGTCCAGTGAAACAAATGATGTTGTGCCTCTGAATGTGGTTCCTTCAGATAACAAGCCGAGTGAAGAAGAGTCTCATGTGAATGTTGATATAGCAGTTGAAGAGAATCCTTTGTCCCCATTGGCACAAGAACCTGTTGCCACCGCAGAGCAATGA 1446 0.4122 MDPINLLPADGVEVVHQNGVHDEPSNSGEDGGAPYDLDPSVTETAETVASNGNFDNFHQSDSAAIDNSFVAEIKESNDIIDGNNVIIITKEEDTKISDQTKQSRAPKGLVKNKNAKAPSSSAVHASLVNKSKIGKDKEASSSVSNGTLALDSRPKQSIKSSRSFNDRQTQLSKPKHPLKSDEASSEVSMEKTKPKSLRKGPVKDQGEEDSSLSTNNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYNKLEERIQAKEVEKSNLQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNTSSSSRVARLSLDEKVSESNPSKEPNPVLQKKPLRRSLPSRLTSEKNNVSKSTTALTPSKATKNEKSSVSRAAKKNINISNATGEEKTETIAATEEKNILSSETNDVVPLNVVPSDNKPSEEESHVNVDIAVEENPLSPLAQEPVATAEQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00778 481 MobiDBLite consensus disorder prediction 253 282 - -
Viun8g00778 481 Coils Coil 247 274 - -
Viun8g00778 481 Pfam Targeting protein for Xklp2 (TPX2) domain 232 303 IPR027329 -
Viun8g00778 481 MobiDBLite consensus disorder prediction 319 341 - -
Viun8g00778 481 MobiDBLite consensus disorder prediction 17 39 - -
Viun8g00778 481 MobiDBLite consensus disorder prediction 138 171 - -
Viun8g00778 481 MobiDBLite consensus disorder prediction 90 233 - -
Viun8g00778 481 MobiDBLite consensus disorder prediction 253 481 - -
Viun8g00778 481 PANTHER PROTEIN WVD2-LIKE 4 96 440 IPR044833 GO:0008017
Viun8g00778 481 MobiDBLite consensus disorder prediction 371 442 - -
Viun8g00778 481 MobiDBLite consensus disorder prediction 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00778 Viun-Chr8 6809829 6815335 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00778 - - gmx:100786958 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00778 8 6809829 6815335 Viun8g00778 8 6809829 6815335 ECH
Viun8g00778 8 6809829 6815335 Viun9g03081 9 38408886 38415921 PCT