Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03012 ATGAATACTCTGAATGAAGCATACAAAGCACACCCTATTACCCTGGGTGATATCATCCCCATAGACTTTTCTTCTTCCCCGAGTTTACCCGATTCTCACTCATGGTCTGAACCCGTTCATGATGATGATGATGATTTCTCTGCAACATCATCCATACCCATCATAGACCTGAAGGATCCGAATGCCCAGAAACTGATAGCCCTTGCATGCGAGAACTGGGGTGCCTTCCATCTGAAGAACCATGGCATACCCTTAGATGTCACCGAAGAGGCCGAACAAGAACTCCAACGCCTCTTCTCTCTCCCTGCTGAACAAAAGATGAAGGCTCTCAGATCCCCCGATAGTGCCTCTGGTTATGGCAACGCAAGGATCTCACCTTTCTTCTCCAAGGCCATGTGGTACGAGGGATTCACCATCATCGGTGGTTCCTCCTCTCACGATGCCAAAAAGATATGGCCCCATGATTATCAAACATTCTGTGACAGAATGGAGAAGTACGAGAAGCAAATGAGGAGCATAGCGGATAGACTAACAGATATGATGATGGAGGTGTTGGGGATTTCGGAGGAGAAAAGGAAGTGGGTCGGTGCGAGCGACGTGAGTACGGCTCTGCAGTTGAATTTCTACCCATGTTGTCCCGAACCGAACCGGGCCATGGGTTTGGCTCCTCACACCGACACTTCAATCTTCACCATTCTTCACGCCAAATCAAGCGGTCTTCAGATCTTCAAGGAGGGAAAGTGGATCCATGTGCACCCTCACCCCAACGCTCTCATTGTTCACACCGGCGATTTCACGCGCATCATGTCCAATGCACGCTTCTGCAGCCCTCTTCATCGCGTGGTGCCGAATCAGGACACTGAACGTTACTCCATGGCTTATTTCTACTCTCCGCCCACCGATTATGTTATCTCTCCGTCGGATCTTAACTCTGTTGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATAAAGTCTCAGAAATTTGCTGACTCCCTTTCTTTCATCAGCACTTGA 1023 0.4888 MNTLNEAYKAHPITLGDIIPIDFSSSPSLPDSHSWSEPVHDDDDDFSATSSIPIIDLKDPNAQKLIALACENWGAFHLKNHGIPLDVTEEAEQELQRLFSLPAEQKMKALRSPDSASGYGNARISPFFSKAMWYEGFTIIGGSSSHDAKKIWPHDYQTFCDRMEKYEKQMRSIADRLTDMMMEVLGISEEKRKWVGASDVSTALQLNFYPCCPEPNRAMGLAPHTDTSIFTILHAKSSGLQIFKEGKWIHVHPHPNALIVHTGDFTRIMSNARFCSPLHRVVPNQDTERYSMAYFYSPPTDYVISPSDLNSVARFRDVTVKEYIGIKSQKFADSLSFIST 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03012 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 298 IPR005123 -
Viun9g03012 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 153 IPR026992 -
Viun9g03012 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 52 323 - -
Viun9g03012 340 SUPERFAMILY Clavaminate synthase-like 20 331 - -
Viun9g03012 340 Coils Coil 163 183 - -
Viun9g03012 340 Gene3D - 24 332 IPR027443 -
Viun9g03012 340 Pfam 2OG-Fe(II) oxygenase superfamily 204 298 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03012 Viun-Chr9 37928857 37930167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03012 52 340 Glycosyltransferase AT5G59530 28.527 5.22e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03012 K04124 - gmx:100818754 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03012 9 37928857 37930167 Viun8g00834 8 7541634 7544355 PCT