Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00834 ATGGCCACTACTCTCTCTGAAGCCTATAGAGACCACCCTCTCCACCTCCATCATATTATCCCCTTAGACTTTTCTTCACTTAGAACCTTGCCTGAAACCCATGCATGGCCTCAATCTGAAGATGCTCATCATCATCATCATGGGGTTGGATCATGCATACCCATCATTGATCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAACTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTAAATGTTGTTCAAGAGGTTGAAGAAGAGGCTAAGAGGCTCTTTGCCCTCCCCGCCGACCGGAAATTGAAGGCCCTACGCTCCGCCGCCGGCGCCACCGGCTACGGCCGGGCACGGATATCATCATTCTTCCCCAAGCACATGTGGCATGAAGGATTCACCATCATGGGCTCTCCATGCGATGATGCCAAAAAGATTTGGCCTAATGACCATACAAGGTTTTGCAACATAATGGAGAATTACCAGAAGCAAATGAAGTTGCTAGCAGAGAAGCTAACCCACATGATCTTGAGCCTGTTGGAGATTTCTGAGGATGAAAAGGGGTGGATTGGTTCAAGTAACCTGTGTGAAGCGGTTCAGCTGAACTTCTACCCTTGTTGCCCTGAGCCGAACCGAGCCATGGGTCTAGCCCCTCACACAGACACTTCCCTCTTCACAATCCTCCACCAGAGCCAAACCAGTGGCCTCCAAATCTTCAAGGAGGGTGCAGGGTGGGTCTCCGTGCACCCTCACCCCAACACCCTCGTTGTTCACACCGGTGACATTCTTCACATCTTGTCCAACTCAAGGTTCCGCTGTGCACTTCACCGTGTCATGGTGAACAGTGCAAGACAAAGATACTCTGTCGCTTATTTCTATGGCCCCCCTTTGGATTATGTTCTTTCTCCATTGCTTCTTCTCACTTCCTTCCCTCGTTTTCGTTCTTTGTCTGTCAAGGACTACATTGGCCTCAAGGCCAACAACCTCGGTGAAGCATTGTCTTTGATTAGTACCATTCACAACTAG 1041 0.4957 MATTLSEAYRDHPLHLHHIIPLDFSSLRTLPETHAWPQSEDAHHHHHGVGSCIPIIDLMDPNAMELIGLACENWGAFQLKNHGIPLNVVQEVEEEAKRLFALPADRKLKALRSAAGATGYGRARISSFFPKHMWHEGFTIMGSPCDDAKKIWPNDHTRFCNIMENYQKQMKLLAEKLTHMILSLLEISEDEKGWIGSSNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLFTILHQSQTSGLQIFKEGAGWVSVHPHPNTLVVHTGDILHILSNSRFRCALHRVMVNSARQRYSVAYFYGPPLDYVLSPLLLLTSFPRFRSLSVKDYIGLKANNLGEALSLISTIHN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00834 346 FunFam Gibberellin 3-beta-dioxygenase 1 18 329 - -
Viun8g00834 346 Pfam 2OG-Fe(II) oxygenase superfamily 203 300 IPR044861 -
Viun8g00834 346 Gene3D - 17 334 IPR027443 -
Viun8g00834 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Viun8g00834 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 300 IPR005123 -
Viun8g00834 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 53 326 - -
Viun8g00834 346 SUPERFAMILY Clavaminate synthase-like 17 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00834 Viun-Chr8 7541634 7544355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00834 53 326 Glycosyltransferase AT5G59530 30.303 7.07e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00834 K04124 - gmx:100780857 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03012 9 37928857 37930167 Viun8g00834 8 7541634 7544355 PCT