Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02978 ATGCTGAGGAAGAGGAACAGGTCCGTGCAGAAGGAACAACACCACATGAGTAATCTGACACAGTGTGAAGCCAATTCAGAGCACTATTCGCAGACTCATCATGGTTTGGGGCGCAACAACATCAAGGGACACCCAATTTTCAATGTTCCTTGTCTGTTTGTGGGTCTAGGTCCGAAAGGGTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTAGGAAACCCTGTTAGGAGGCCAAGATCTTCACCTCATGAAGGGCACCCAAGGAGTTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGACTGTTCTAGGTTTTCTGGGAAAATTCTGCAGTCACCAGAGAGCAAGAGGGTTAGTCTCAGTCCCCAAGTGATGATCAAAGCCCCAAATTGCCAAAACCATAGGGATTTTCTTGAGGGATCCAAGTCTTTGCCCAAAGATTTTTGCAAGGCCCCTAAAAATGACTCTGTTACCCACAAGGGTGAATCTGAGTCCACTGTTCTTTTTGAAATTGGAGAAAGTGACCTTGAGCATGAACTGTTTGGGAGAACCAGAACCAGAACCAGGTCTTGTTCATTGGACTCTTGCAGTCCACTGAAAGGCCTTTCTGGCTTGAACACTTCCTTCTCTGATTCAGACACTGATAATTTTGCTGTGAAAGATGTGAACATTCAATGGAGCTCTCCCCCTCATTTTATTGGGGGAAGCCAGAACTCAAATACCTTCCCACCTACAAAGTTGAACACAAACCCTCTTTCTGTTAGCTCCTCCAATGAATTTATCAAGTCTCTGTCTGCTACTGAGATTGAACTCTCTGAGGACTACACATGTGTGATTTCCTACGGCCCTAATCCCAAAACAACTCACATTTTTGGGGATTGCATTCTGGAGACTCATTCCAATGCATTCAAAATCCATTCTAAGAATGAAGAGAAGGAGAAGTTAGTGAACACTGTTGCTAACTGGTCAGGGAGTCCAAACCCATACCCCTCAAGCGACTTCTTGAGTTTCTGCCACCATTGCAACAAGAAACTAGAAGAGGGAAAGGACATTTATATTTATGGGGGTGAAAAGGCATTCTGCAGTTTAACTTGTCGTGCCATGGAGATGATGATTGATGAGGAACTGGAGAAATCCAACACCGACCCTCCTTGTGAAAACTCTGCAAAGCCAAAACTCGGTGAGCTACTTTTTGAAACAAGCATTGTCACAGGTTCATAG 1266 0.4455 MLRKRNRSVQKEQHHMSNLTQCEANSEHYSQTHHGLGRNNIKGHPIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDARVLSNLGNPVRRPRSSPHEGHPRSWDCCKVGLGIVESLEDCSRFSGKILQSPESKRVSLSPQVMIKAPNCQNHRDFLEGSKSLPKDFCKAPKNDSVTHKGESESTVLFEIGESDLEHELFGRTRTRTRSCSLDSCSPLKGLSGLNTSFSDSDTDNFAVKDVNIQWSSPPHFIGGSQNSNTFPPTKLNTNPLSVSSSNEFIKSLSATEIELSEDYTCVISYGPNPKTTHIFGDCILETHSNAFKIHSKNEEKEKLVNTVANWSGSPNPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSLTCRAMEMMIDEELEKSNTDPPCENSAKPKLGELLFETSIVTGS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02978 421 ProSiteProfiles Zinc finger FLZ-type profile. 348 392 IPR007650 -
Viun9g02978 421 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g02978 421 MobiDBLite consensus disorder prediction 66 98 - -
Viun9g02978 421 Pfam zinc-finger of the FCS-type, C2-C2 342 390 IPR007650 -
Viun9g02978 421 PANTHER FCS-LIKE ZINC FINGER 11 1 418 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02978 Viun-Chr9 37776765 37779711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02978 - - gmx:100779553 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02978 9 37776765 37779711 Viun9g02978 9 37776765 37779711 ECH
Viun8g00870 8 8363797 8366454 Viun9g02978 9 37776765 37779711 PCT