Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00870 ATGTTGAGGAAGAGAACCAGGTCAATCCAGAAAGATCAACACCAACCTTGCAAGATGGGAATTTCTGAGGCCAATTTTGAATCATATTCTCAGGCTCATGCTTTGGGGAGCAATGTCAAGAGCAACTCAATTTTCAATGCCCCTCTTCTGTTTGTAGGAATGGGTCCTAAAGGCTTGTTGGATTCTGATTCAGTTAAGAGCCCCACTTCCCCACTAGATGTTTCATTCTTTTCAAATTTAAGTAACCCCTTTAGAACCCTAAGTTCATTGTCCAACGAGGGGCAACAAAGGAGCTGGGACTGTGCCAAAGTAGGTCTAAGTATTATAGATTCTTTGGAAGAATGTTCCAAGTTTTCTAGAAAAATTCTCCAAGCATCAGAGAGCAAGAAGACTGGTCTCAGTCCTCAAATGATTACTAAAGCCCCAAATTGTAAACCCTATATGGATATGGATTATGCTCAGGCATCTAAGTCTTTACCCAAAGATTTTTGCAAGATCCATTGTACTCAAAATGGTTATATTTTTCCCAAGGGTGAGTCCACTGTTCTTTTTGAGATTGGAGAGACCCCACCAGAACATGAGTCCTTTGAGAAAACTGTGTCTGTTTCATTGGACTCTTGCAGTACTATTAGGAATCTTTCTGGTTTAACTGGTCCCAACTTTGATTCTGACCCTGAGAATCTTGCTTTGAAACACAAGTGCTCTCCTCCTCATTTTATTGGAGGAAGCCATAACAAAGTTTTGATACCTGCTGAATTAAATTCAAACCCTGTGGCTGCAGTGTCTTCTAATGAATTCATTGAGTCTCTATCAGCTAGTGAGATTGAACTCTCTGAGGATTACACCTGTGTGATATCTCATGGTCCTAATCCTAAAACAACACATATTTTCTGTGACTGCATTTTGGAAACTCATGCAACTGATGTTGGAAAACCTAACAAGAATGGAGAGGATGGAAAGGAAACTTCTCTTTTCAGTGTTAACAGCATGCATATTCCAAACCATTTTCCTTCTGAAGACTTCTTAAGTTTCTGTCACCATTGTAACAAGAAGTTGGAAGAGGGGAAAGACATTTACATCTATAGAGGTGAAAAAGCATTTTGCAGTTTGAACTGCCGCTCAGTAGAGATCATGCTTGATGAGGAGCTAGAAAAATCTGATTCATCACCTGAAAATTCTCCAGAAGTGAGAATTTGA 1197 0.3968 MLRKRTRSIQKDQHQPCKMGISEANFESYSQAHALGSNVKSNSIFNAPLLFVGMGPKGLLDSDSVKSPTSPLDVSFFSNLSNPFRTLSSLSNEGQQRSWDCAKVGLSIIDSLEECSKFSRKILQASESKKTGLSPQMITKAPNCKPYMDMDYAQASKSLPKDFCKIHCTQNGYIFPKGESTVLFEIGETPPEHESFEKTVSVSLDSCSTIRNLSGLTGPNFDSDPENLALKHKCSPPHFIGGSHNKVLIPAELNSNPVAAVSSNEFIESLSASEIELSEDYTCVISHGPNPKTTHIFCDCILETHATDVGKPNKNGEDGKETSLFSVNSMHIPNHFPSEDFLSFCHHCNKKLEEGKDIYIYRGEKAFCSLNCRSVEIMLDEELEKSDSSPENSPEVRI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00870 398 Pfam zinc-finger of the FCS-type, C2-C2 336 382 IPR007650 -
Viun8g00870 398 ProSiteProfiles Zinc finger FLZ-type profile. 340 384 IPR007650 -
Viun8g00870 398 PANTHER FCS-LIKE ZINC FINGER 11 1 395 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00870 Viun-Chr8 8363797 8366454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00870 - - vum:124831358 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00870 8 8363797 8366454 Viun9g02978 9 37776765 37779711 PCT