Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02966 ATGGGGGGTGGAAAGTTTGGAAGGTGTGATTTTTTTGTTGTTGTCGATGTTGTTGTGTTGGTGGTGTTGGTGGGGTCAGTGGGTGGGATTGGTGTGAACTGGGGGACACAATCGACACACCCTTTGTCTCCTTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGGATTCCCAATGACATGCTTTATACGCTCGCCAACAGTGTTGAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACATGTCTCTTCTGGAGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGCACTTACGAAACCACAACTCTTCCAGCACTTCAAAACATTCAGGCAGCTCTAACAAAGTCCGGTTTGAGCAACCGTGTGAAGGTGACAGTCCCCTTAAACGCCGACGTGTACCAAAGCTCGTCAGAGAAGCCGTCAGACGGCGGTTTCAGACCAGACATCAACAGTCTGATGGTGCAGATTGTGAAGTTCTTGAACGACAATGGCGCACCTTTCACAGTGAACATCTACCCTTTCATCAGCCTCTACGCCGACCCCAATTTCCCTGTTGACTATGCCTTCTTTAACGGCTACCAGCCTGCTATAAACGACAACGGAAGAACCTACGACAATGTGTTTGATGCTAACCACGATACTTTGGTGTGGGCACTGCAGAAGAACGGCTTCGGAAACTTGCCTATAATTGTAGGGGAAATTGGGTGGCCCACAGATGGAGACAGAAACGCAAACCTTCAATACGCACAACGTTTCAACCAAGGTTTCATGTCGCGTTACATGTCTGGAAAAGGGACCCCAATGAGGCCTAATCCTATAGATGCTTATTTGTTCAGTCTGATAGATGAAGATGCGAAGAGCATTCAGCCAGGGAACTTTGAGCGTCACTGGGGCATGTTTTACTTGGATGGACAACCAAAATACCAGCTTAATCTTGGGTCTGCAAGAGGTAATAATGGGTTAGTGGGTGCTGATGGGGTTGATCACTTGGCTAAAAAATGGTGCGTTTTGAAACCTTCTGCAAACCTTAACGATGACCAAGTTGCACCTAGTGTGGCCTATGCCTGTCAGAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCTTGTGGGAATTTGGATGTGCATGGTAACATTTCTTATGCGTTTAACAGTTACTATCAGGTCAATGACCAGATGGACAGTGCCTGCAAATTCCCTGGCCTTTCTATGGTCACTGACAAGGATCCTTCTGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCAGTGCTGCATGGAAAAGTTGGATCTCTAACCACACTGCTGTTTTCTTTTGTAGTTTTCCTATGTTGTAATCTTTTGTTTTGA 1470 0.4599 MGGGKFGRCDFFVVVDVVVLVVLVGSVGGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGTYETTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRPDINSLMVQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPNPIDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGQPKYQLNLGSARGNNGLVGADGVDHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMVTDKDPSVGDCKFRIMIQTDSAVLHGKVGSLTTLLFSFVVFLCCNLLF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02966 489 Gene3D Glycosidases 29 356 - -
Viun9g02966 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 443 IPR044965 GO:0004553|GO:0005975
Viun9g02966 489 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Viun9g02966 489 FunFam Glucan endo-1,3-beta-glucosidase 5 29 355 - -
Viun9g02966 489 FunFam Glucan endo-1,3-beta-glucosidase 8 366 463 - -
Viun9g02966 489 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Viun9g02966 489 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Viun9g02966 489 Gene3D - 366 463 - -
Viun9g02966 489 SMART X8_cls 370 454 IPR012946 -
Viun9g02966 489 Pfam X8 domain 370 440 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02966 Viun-Chr9 37692438 37696253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02966 11 483 Glycoside Hydrolase AT4G31140 67.992 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02966 K19893 - gmx:100796552 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02966 9 37692438 37696253 Viun8g00872 8 8392274 8395643 PCT