Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02942 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAAAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCAAAGCGGTACTTTTATTGCTTGAACAGGTTTTTGAGTCAGAAACTGAGCAAGACTGAGTTTGACAAGTTTTGTTTCCGAGTGCTTGGGAGGGAAAATCTTCCACTGCACAACCATTTTATAAAGTCAATATTGAAGAATGCCTGCCAAGCCAAGATCCCACCGTCAATTCATCCGTCAGGTCCCCAGAAGTTTGGAGAACATGCTTCAGACATATCTCCTGGTAGAGAAGATGGGCACGAACAGAGTGTTGGCAGCTTCCACAATCAGAATCAAAAAGCTCCCGTTTGGTCAAATGGGATTTTGCCGGTATCCCCTAAGGTTAGGCCTGGCATACGTGAGCGGAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCATCAATCCATGGGTACAGATGATTGTGGTAGTAAGGTTGATATGGAGAATGGAATTCTTACTCCTTGCGATTATCAGAGACCAATGCAGCATCTTCAAGCTGTTGCTGAGCTACCAGAGTATGAAAGAGGAGATGCTGATCGGCGACCTGTAGAAAAGCCAAGAATACATGGGAAAGGGCCAGCTGAAATGTCAATTGTTGAAGATGGGGAAGAAGTTGATCAGTTAAATCGCTTGGGTCTTTCTAAAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGAGGAGCCCGCAAAGCATTGCCAGTGAGTAGTGCTGGCTATTTTGATAGTTGTTGTGACAGTGGCAGGTTGTCTGATACAGAAACACTCAGGAGGCGCATGGATCAGATTGCTGCAGTACAAGGTCTTGGAGCCATTTCTATGGAATGTGCAAACATGTTGAATAATATGTTGGATGTCTACTTGAAACGGTTGATCAGGTCTTGTGTCGATTTAGTTAGAGCTAGGTCTACAAATGAGCCTAGGAAGACCCCTGCCCCCAAACAGCAGATGCAGGGTAAGGTCATCAATGGCATGTGGCCAAACAATCATTTACACGTGCAGTGTGATGGTGCAGCAGAAGCTGTGTCAGAACATAAACCAGCATGCTTAGTTTCTTTGCATGATTTTAAAGTTGCCATGGAACTAAATCCACAGCAACTCGGAGAAGATTGGCCACTGTGGTTGGAAAAAATATCCATGCAATCGTTTGAAGAATAA 1257 0.4471 MQPQQSSRIDLGELKAQIVKKLGADKSKRYFYCLNRFLSQKLSKTEFDKFCFRVLGRENLPLHNHFIKSILKNACQAKIPPSIHPSGPQKFGEHASDISPGREDGHEQSVGSFHNQNQKAPVWSNGILPVSPKVRPGIRERKLRDRPSPLGPNGKVDSVSHQSMGTDDCGSKVDMENGILTPCDYQRPMQHLQAVAELPEYERGDADRRPVEKPRIHGKGPAEMSIVEDGEEVDQLNRLGLSKSPLIAPLGIPYCSASVGGARKALPVSSAGYFDSCCDSGRLSDTETLRRRMDQIAAVQGLGAISMECANMLNNMLDVYLKRLIRSCVDLVRARSTNEPRKTPAPKQQMQGKVINGMWPNNHLHVQCDGAAEAVSEHKPACLVSLHDFKVAMELNPQQLGEDWPLWLEKISMQSFEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02942 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
Viun9g02942 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 417 IPR024738 GO:0070461
Viun9g02942 418 MobiDBLite consensus disorder prediction 110 124 - -
Viun9g02942 418 MobiDBLite consensus disorder prediction 82 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02942 Viun-Chr9 37528311 37531033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02942 - - gmx:100819343 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00900 8 8964275 8966925 Viun9g02942 9 37528311 37531033 PCT