Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00900 ATGCAACCCCCACTCAGTTCAAGAATCAATTTGGTCGAATTAAAAGCGCAGATTGTGAAGAGGATTGGGGCGGAGAAGTCAAAGCAGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTTGATAGGTCATGTTATCGGGTACTTGGCAGGGAGAATCTTCCGTTACACAATCATTTCATAAAGTCAATTTTGAAAAATGCTTGCCAAGCCAAGACCCCACCGCCAGTCCAGCAACTGACAGGTCCTCCAAAAACTGGAACACTTGTCCATCATGCATCTGGTCGAGAGGATGGACATGAAAATAGTTTTGTTAACATCCAAAATCAGAATGTTTCCATTTGGTCCAATGGGGTTGTGCCGGTTTCGCCACGCAAGTTAAGGTCTGGCGGCCGTGATCGTAAGCTTAAAGATAGACTGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACACCTACAGAAGACAGCAGTAGTAAGGTTGATATGGAGAATGATGTTCTTACTCCATGTGATTATCAAAGACCTACACAACATCTTCAGGTAGTTGATGAGCTACTTGAGAATGGTATGGGTGATGCTCTTCAGAGACCTGCTAAGAAACCAAGAATATATGGGAATGGACCAACCGATGCATCAGTTATTGAAAAGGGGGAAGAAGTGGAGCAATCAAACCGCATCATTTTTTCTAGAAGTCCTTTGGTAGCACCACTTGGGATTCGCTACTGCACCACAAGTGTTGGTGGGGCCCGCAAAGCGATGCCAGTGAATGGCACTAGTAATTTTGTTAGGTGTTGCGACAGTGGTAGGTTATCTAATACAGATACATTGAGAAGGCGCATGGAACAGATTGCCACAGTACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCAAATACATTGAATAATATGTTAGATGTGTACTTGAAAAGGTTGATCAGATCTTGTGTTAATTTAGTGGGAGCTAGGTCTGGAAATGAACATAGGAAGCTCCCTGTCTCGAAACAGCAGATTCAGGGGAGGGTCATTAATGGTGTCTGGCCAAATAATCATTTACATGTGCAGAATGCCAGTGGGCTGGCAGAACCTGAGGCTGGACATGGACCACCACACTCGGTATCTATACATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCTACTTGGAGAGGATTGGCCCGTACAACTGGAGAAAATTTCTATGCGATCATTTGAGGAATGA 1257 0.4375 MQPPLSSRINLVELKAQIVKRIGAEKSKQYFYYLNRFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQQLTGPPKTGTLVHHASGREDGHENSFVNIQNQNVSIWSNGVVPVSPRKLRSGGRDRKLKDRLSPLGPNGKVDSVAHQSTPTEDSSSKVDMENDVLTPCDYQRPTQHLQVVDELLENGMGDALQRPAKKPRIYGNGPTDASVIEKGEEVEQSNRIIFSRSPLVAPLGIRYCTTSVGGARKAMPVNGTSNFVRCCDSGRLSNTDTLRRRMEQIATVQGLGGVSMECANTLNNMLDVYLKRLIRSCVNLVGARSGNEHRKLPVSKQQIQGRVINGVWPNNHLHVQNASGLAEPEAGHGPPHSVSIHDFKVAMELNPQLLGEDWPVQLEKISMRSFEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00900 418 MobiDBLite consensus disorder prediction 79 103 - -
Viun8g00900 418 MobiDBLite consensus disorder prediction 133 147 - -
Viun8g00900 418 MobiDBLite consensus disorder prediction 129 173 - -
Viun8g00900 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 331 IPR024738 GO:0070461
Viun8g00900 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 417 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00900 Viun-Chr8 8964275 8966925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00900 - - gmx:100811524 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00900 8 8964275 8966925 Viun8g00900 8 8964275 8966925 ECH
Viun8g00900 8 8964275 8966925 Viun9g02942 9 37528311 37531033 PCT