Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02611 ATGGCTTCCTCCACTGCTTTGCCTTTGGGCTCACTCATAGCAATCACCATGCTTCTGCCAACCCTCGCAACCGTCCACACCGTCGGAGATTCTTCAGGTTGGGCAATCGGTGCTGATTATAGTTCATGGACCGGTGACAAGACCTTCGCAGTGGGTGATACTCTTGTGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAGAGTGACTACAAATCATGCAGCGCAGGGAATTCAATTAGTACAGACAGTAGTGGCGCAACCACCATTGCTCTGAAAACTGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGTGGCATGAAACTTGCCGTCACTGTCAAAGCAGGAAAAGACACTACTCCTTCAACCGGAAAGGCTTCACCTTCTGATGGAACAGCCACCACACCAACCTCCACCACCACCACTACAACCACCGCTGCTAGATCAAACTCGGCTTCAACAAGTGGTGTGTCTTCAATTGTTGCCATGTTGATTGTTTCATGGATCTCTTTCTTTGGCTTGCGCATGGCGTGA 555 0.4901 MASSTALPLGSLIAITMLLPTLATVHTVGDSSGWAIGADYSSWTGDKTFAVGDTLVFNYGAGHTVDEVKESDYKSCSAGNSISTDSSGATTIALKTAGTHYFICSVPGHCSGGMKLAVTVKAGKDTTPSTGKASPSDGTATTPTSTTTTTTTAARSNSASTSGVSSIVAMLIVSWISFFGLRMA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02611 184 PANTHER BLUE COPPER PROTEIN 23 148 IPR039391 GO:0009055
Viun9g02611 184 CDD Phytocyanin 24 120 - -
Viun9g02611 184 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Viun9g02611 184 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Viun9g02611 184 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Viun9g02611 184 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Viun9g02611 184 FunFam Blue copper 22 126 - -
Viun9g02611 184 Gene3D - 22 127 IPR008972 -
Viun9g02611 184 MobiDBLite consensus disorder prediction 125 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02611 Viun-Chr9 35129142 35130232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02611 9 184 Miscellaneous Gene Families AT1G22480 42.938 2.19e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02611 - - var:108331136 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02611 9 35129142 35130232 Viun9g02611 9 35129142 35130232 ECH
Viun8g01551 8 25955791 25957161 Viun9g02611 9 35129142 35130232 PCT